RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ZFP28Q8NHY6 868 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 SMPDL3BQ92485 455 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 ZBED6CLQ96FA7 236 aaPredicted RBP20.37■□□□□ 0.85
ACTN1-220ENST00000556433 FCRL1Q96LA6 429 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 CCT7Q99832 543 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 TUBB1Q9H4B7 451 aa20.37■□□□□ 0.85
ACTN1-220ENST00000556433 EIF3LQ9Y262 564 aaKnown RBP20.37■□□□□ 0.85
ACTN1-220ENST00000556433 PCNX3Q9H6A9 2034 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 TBX19O60806 448 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 NKX2-2O95096 273 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 CHEK2O96017 543 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 NEFHP12036 1026 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 KIR2DL2P43627 348 aaPredicted RBP20.36■□□□□ 0.85
ACTN1-220ENST00000556433 CLDN20P56880 219 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 SIRPAP78324 504 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 PCLAFQ15004 111 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 ZNF385BQ569K4 471 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 CLHC1Q8NHS4 586 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 SLC9A6Q92581 669 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 HOXB13Q92826 284 aaPredicted RBP20.36■□□□□ 0.85
ACTN1-220ENST00000556433 ZNF764Q96H86 408 aaPredicted RBP20.36■□□□□ 0.85
ACTN1-220ENST00000556433 FAM111AQ96PZ2 611 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 TRMOQ9BU70 441 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 OPN3Q9H1Y3 402 aaPredicted RBP20.36■□□□□ 0.85
ACTN1-220ENST00000556433 AP4B1Q9Y6B7 739 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 ACANP16112 2415 aa20.36■□□□□ 0.85
ACTN1-220ENST00000556433 HRNRQ86YZ3 2850 aaPredicted RBP20.35■□□□□ 0.85
ACTN1-220ENST00000556433 IGLV3-32A0A0A0MS00 114 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 TLDC2A0PJX2 215 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 CD79BP40259 229 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 MAP3K8P41279 467 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 RPS3AP61247 264 aaKnown RBP20.35■□□□□ 0.85
ACTN1-220ENST00000556433 RPL38P63173 70 aaKnown RBP20.35■□□□□ 0.85
ACTN1-220ENST00000556433 KANK2Q63ZY3 851 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 ZNF474Q6S9Z5 364 aaPredicted RBP20.35■□□□□ 0.85
ACTN1-220ENST00000556433 RNF165Q6ZSG1 346 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 SZRD1Q7Z422 152 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 GALNT10Q86SR1 603 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 CDRT4Q8N9R6 151 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 FNDC9Q8TBE3 224 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 ZNF845Q96IR2 970 aaPredicted RBP20.35■□□□□ 0.85
ACTN1-220ENST00000556433 WFIKKN1Q96NZ8 548 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 RNF122Q9H9V4 155 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 ZNF175Q9Y473 711 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 TESMINQ9Y4I5 508 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 DNAJC15Q9Y5T4 150 aa20.35■□□□□ 0.85
ACTN1-220ENST00000556433 MAP1AP78559 2803 aaPredicted RBP20.35■□□□□ 0.85
ACTN1-220ENST00000556433 A0A1W2PPR1 153 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 SHISA8B8ZZ34 492 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 EMC8O43402 210 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 PCYT1AP49585 367 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 PON3Q15166 354 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 SGCBQ16585 318 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 GALNTL6Q49A17 601 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 DDIASQ8IXT1 998 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 OR4C3Q8NH37 302 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 FBXO30Q8TB52 745 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 SLC39A3Q9BRY0 314 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 ACSS1Q9NUB1 689 aaPredicted RBP20.34■□□□□ 0.85
ACTN1-220ENST00000556433 KLHL28Q9NXS3 571 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 ELOVL5Q9NYP7 299 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 NTMQ9P121 344 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 STOML1Q9UBI4 398 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 VDAC3Q9Y277 283 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 TMED5Q9Y3A6 229 aa20.34■□□□□ 0.85
ACTN1-220ENST00000556433 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 ALG1L2C9J202 215 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 LSM1O15116 133 aaKnown RBP20.33■□□□□ 0.85
ACTN1-220ENST00000556433 NDUFB5O43674 189 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 FGF4P08620 206 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 ACP2P11117 423 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 FRKP42685 505 aaPredicted RBP20.33■□□□□ 0.85
ACTN1-220ENST00000556433 KCNJ5P48544 419 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 PDE7AQ13946 482 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 TMEM44Q2T9K0 475 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 FIGNL1Q6PIW4 674 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 HOMEZQ8IX15 550 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 METTL25Q8N6Q8 603 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 SLC16A11Q8NCK7 471 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 GIMAP5Q96F15 307 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 C16orf58Q96GQ5 468 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 MS4A4EQ96PG1 132 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 NEUROD4Q9HD90 331 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 C6orf203Q9P0P8 240 aaPredicted RBP20.33■□□□□ 0.85
ACTN1-220ENST00000556433 TRAF6Q9Y4K3 522 aa20.33■□□□□ 0.85
ACTN1-220ENST00000556433 KCNK2O95069 426 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 OXSR1O95747 527 aaPredicted RBP20.32■□□□□ 0.84
ACTN1-220ENST00000556433 CGAP01215 116 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 CHRNGP07510 517 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 BCKDHAP12694 445 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 POU2F1P14859 743 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 CD53P19397 219 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 EFNA1P20827 205 aaPredicted RBP20.32■□□□□ 0.84
ACTN1-220ENST00000556433 ALDH3A1P30838 453 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 ASMTP46597 345 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 OCRLQ01968 901 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 FGFBP1Q14512 234 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 DUSP5Q16690 384 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 MFSD12Q6NUT3 480 aa20.32■□□□□ 0.84
ACTN1-220ENST00000556433 ZNF610Q8N9Z0 462 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms