RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 MSI2Q96DH6 328 aaKnown RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 DTNBP1Q96EV8 351 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 PDLIM5Q96HC4 596 aaKnown RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 OSBPL11Q9BXB4 747 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 PINK1Q9BXM7 581 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 CAPS2Q9BXY5 557 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 PARD6BQ9BYG5 372 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 TRIM2Q9C040 744 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 OR10A5Q9H207 317 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 EHD1Q9H4M9 534 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 MANSC1Q9H8J5 431 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 PLAC1Q9HBJ0 212 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 EML4Q9HC35 981 aaKnown RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 NGBQ9NPG2 151 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 C20orf96Q9NUD7 363 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 FAIMQ9NVQ4 179 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 CISD1Q9NZ45 108 aaKnown RBP6.1□□□□□ -1.43
ATXN3-236ENST00000556220 KLRF1Q9NZS2 232 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 FBXL2Q9UKC9 423 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 IKZF3Q9UKT9 509 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 RAB21Q9UL25 225 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 ZNF175Q9Y473 711 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 NBEAL2Q6ZNJ1 2754 aa6.1□□□□□ -1.43
ATXN3-236ENST00000556220 PRAMEF25A6NGN4 478 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 MIF4GDA9UHW6 222 aaKnown RBP6.09□□□□□ -1.43
ATXN3-236ENST00000556220 H0YC42 278 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 KIF2AO00139 706 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-236ENST00000556220 KIAA0513O60268 411 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 PRAMEF4O60810 478 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 UGT2B11O75310 529 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 AQP8O94778 261 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 WDR47O94967 919 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 ALDOAP04075 364 aaKnown RBP6.09□□□□□ -1.43
ATXN3-236ENST00000556220 SCG5P05408 212 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 SLC35E2BP0CK96 405 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 SLC35E2P0CK97 266 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 FPR2P25090 351 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 GABRB3P28472 473 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 SUCLG1P53597 346 aaKnown RBP6.09□□□□□ -1.43
ATXN3-236ENST00000556220 PGGT1BP53609 377 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 TERF1P54274 439 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 TPD52P55327 224 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-236ENST00000556220 SARNPP82979 210 aaKnown RBP6.09□□□□□ -1.43
ATXN3-236ENST00000556220 CDKL1Q00532 357 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 ZNF844Q08AG5 666 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 PON3Q15166 354 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 RAB35Q15286 201 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 PDCD2Q16342 344 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-236ENST00000556220 PPP1R3AQ16821 1122 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 TMEM35AQ53FP2 167 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 HSP90AA5PQ58FG0 334 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 TEX35Q5T0J7 233 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 RBM20Q5T481 1227 aaKnown RBP6.09□□□□□ -1.43
ATXN3-236ENST00000556220 AGAP6Q5VW22 663 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 PRAMEF9Q5VWM5 478 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 C18orf63Q68DL7 685 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 OR4C11Q6IEV9 310 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 GPR180Q86V85 440 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 ZNF525Q8N782 197 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 STEAP2Q8NFT2 490 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 OR6K3Q8NGY3 331 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 C10orf105Q8TEF2 133 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 S100PBPQ96BU1 408 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 SERPINB12Q96P63 405 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 RHOXF2Q9BQY4 288 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 HDHD5Q9BXW7 423 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 TXLNGYQ9BZA5 131 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 NXF5Q9H1B4 397 aaKnown RBP6.09□□□□□ -1.43
ATXN3-236ENST00000556220 CXorf21Q9HAI6 301 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 IARS2Q9NSE4 1012 aaKnown RBP6.09□□□□□ -1.43
ATXN3-236ENST00000556220 ZDHHC18Q9NUE0 388 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 GPRC5BQ9NZH0 403 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 DKKL1Q9UK85 242 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 SNX8Q9Y5X2 465 aa6.09□□□□□ -1.43
ATXN3-236ENST00000556220 A0A0A6YYJ9 748 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 TMEM89A2RUT3 159 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 DPRXA6NFQ7 191 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 EFCAB8A8MWE9 144 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 SLCO1B7G3V0H7 640 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 SH3BGRLO75368 114 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 PRKRAO75569 313 aaKnown RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 VENTXO95231 258 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 TGFAP01135 160 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 FGGP02679 453 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 AHSGP02765 367 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 CT62P0C5K7 136 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF20P17024 532 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 TNFRSF1AP19438 455 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 PTNP21246 168 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 GPX3P22352 226 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 TCEA1P23193 301 aaKnown RBP6.08□□□□□ -1.44
ATXN3-236ENST00000556220 CNTFP26441 200 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 CASP2P42575 452 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 SSR2P43308 183 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 NEK2P51955 445 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 CTBP2P56545 445 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 C21orf58P58505 322 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 TNFRSF17Q02223 184 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 BSPH1Q075Z2 132 aa6.08□□□□□ -1.44
ATXN3-236ENST00000556220 UAP1Q16222 522 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms