RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PTGES3Q15185 160 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SEC23BQ15437 767 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SHBQ15464 509 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 NPTX1Q15818 432 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 EIPR1Q53HC9 387 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 ENTPD8Q5MY95 495 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SLC25A30Q5SVS4 291 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 C1orf94Q6P1W5 598 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 PGBD2Q6P3X8 592 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 PODNL1Q6PEZ8 512 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 KLHL17Q6TDP4 642 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 DEF8Q6ZN54 512 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 PRSS48Q7RTY5 328 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 PRSS42Q7Z5A4 293 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 RBM45Q8IUH3 476 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 LACC1Q8IV20 430 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 ERI1Q8IV48 349 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 PEX5LQ8IYB4 626 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 ENTHD1Q8IYW4 607 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 ZNF619Q8N2I2 560 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 D2HGDHQ8N465 521 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 MORN4Q8NDC4 146 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 BPIFB6Q8NFQ5 453 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 OR9Q2Q8NGE9 314 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 VANGL1Q8TAA9 524 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 CNIH3Q8TBE1 160 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SLC7A13Q8TCU3 470 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 APH1BQ8WW43 257 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 OIT3Q8WWZ8 545 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 CDS1Q92903 461 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SLC35B4Q969S0 331 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 MUL1Q969V5 352 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 ZG16BQ96DA0 208 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 RBM18Q96H35 190 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SLC41A2Q96JW4 573 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 TGM7Q96PF1 710 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 ELF4Q99607 663 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 WFDC6Q9BQY6 131 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 FNDC11Q9BVV2 318 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 ANKRA2Q9H9E1 313 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 CACYBPQ9HB71 228 aaKnown RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 EQTNQ9NQ60 294 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 PRMT8Q9NR22 394 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 MAN2C1Q9NTJ4 1040 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 FKBP14Q9NWM8 211 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SUSD2Q9UGT4 822 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 CLCA2Q9UQC9 943 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 RNF6Q9Y252 685 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 WDR45Q9Y484 360 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 CHST2Q9Y4C5 530 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 CLDN16Q9Y5I7 305 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SNX5Q9Y5X3 404 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 SZT2Q5T011 3432 aa7.71□□□□□ -1.18
ATXN3-235ENST00000556082 MN1Q10571 1320 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-235ENST00000556082 TNRC18O15417 2968 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-235ENST00000556082 PTGES3LE9PB15 166 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 M0R3H8 397 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 RGS10O43665 173 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 DUX1O43812 170 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 OR10H2O60403 315 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 OR10H3O60404 316 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 BRINP1O60477 761 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 SDC3O75056 442 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 CPNE3O75131 537 aaKnown RBP7.7□□□□□ -1.18
ATXN3-235ENST00000556082 CYP7B1O75881 506 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 OR5F1O95221 314 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 CBX7O95931 251 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 PCMT1P22061 227 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 FUT4P22083 530 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 CHMP24386 653 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 CD1CP29017 333 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 ALDH4A1P30038 563 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 SLC5A2P31639 672 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 STT3AP46977 705 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 UGT2B15P54855 530 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 GFERP55789 205 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 OR1D5P58170 312 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 ZXDAP98168 799 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 BNC1Q01954 994 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 ID2Q02363 134 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 FUT7Q11130 342 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 ST3GAL3Q11203 375 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 STX4Q12846 297 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 DECR1Q16698 335 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 DEFB110Q30KQ9 67 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 FGD3Q5JSP0 725 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 SLX4IPQ5VYV7 408 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 LYSMD4Q5XG99 296 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 LAIR1Q6GTX8 287 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 KANSL1Q7Z3B3 1105 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 ZER1Q7Z7L7 766 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 VRK2Q86Y07 508 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 SLC35F3Q8IY50 421 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 SLC9A6Q92581 669 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 DIO2Q92813 273 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 RIT1Q92963 219 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 SLC38A4Q969I6 547 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 UBE2FQ969M7 185 aa7.7□□□□□ -1.18
ATXN3-235ENST00000556082 NMD3Q96D46 503 aaKnown RBP7.7□□□□□ -1.18
ATXN3-235ENST00000556082 OTUB1Q96FW1 271 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms