RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 RND1Q92730 232 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 OR52B2Q96RD2 323 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 TTYH2Q9BSA4 534 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 PRDM14Q9GZV8 571 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 DSN1Q9H410 356 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 SERHL2Q9H4I8 314 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 INTS9Q9NV88 658 aaKnown RBP12.47□□□□□ -0.41
SHMT2-219ENST00000555563 GIN1Q9NXP7 522 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 ALKBH4Q9NXW9 302 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 TAS2R10Q9NYW0 307 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 COQ3Q9NZJ6 369 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 PCDHGB3Q9Y5G1 929 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 KLF2Q9Y5W3 355 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-219ENST00000555563 KCNE3Q9Y6H6 103 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 UTP20O75691 2785 aaKnown RBP12.47□□□□□ -0.41
SHMT2-219ENST00000555563 PHF3Q92576 2039 aaKnown RBP12.47□□□□□ -0.41
SHMT2-219ENST00000555563 PRSS51A0A1B0GVH4 220 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 ENO4A6NNW6 628 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 CLDN14O95500 239 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 ANGPTL1O95841 491 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 ACTL6AO96019 429 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 NGFRP08138 427 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 GLI4P10075 376 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 IDO1P14902 403 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 DPP4P27487 766 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 HTR1EP28566 365 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 GCKP35557 465 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 CLK3P49761 638 aaKnown RBP12.46□□□□□ -0.41
SHMT2-219ENST00000555563 DGKQP52824 942 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 GFRA1P56159 465 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 ZNF630Q2M218 657 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-219ENST00000555563 ACSF3Q4G176 576 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-219ENST00000555563 ANXA8L1Q5VT79 327 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 BHLHB9Q6PI77 547 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 ACAD11Q709F0 780 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 IFNEQ86WN2 208 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 VPS37AQ8NEZ2 397 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 ADAMTS15Q8TE58 950 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 ABTB1Q969K4 478 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-219ENST00000555563 DTNBP1Q96EV8 351 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 SLC35G5Q96KT7 338 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 SFXN2Q96NB2 322 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 OR7D2Q96RA2 312 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 G6PC3Q9BUM1 346 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 SDHAF3Q9NRP4 125 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 MED11Q9P086 117 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 PCDHGB4Q9UN71 923 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 CAMK2AQ9UQM7 478 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 RNF6Q9Y252 685 aa12.46□□□□□ -0.41
SHMT2-219ENST00000555563 RPH3AQ9Y2J0 694 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-219ENST00000555563 IGLV3-32A0A0A0MS00 114 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 FAM90A27PA6NNH2 459 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 KDM4EB2RXH2 506 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-219ENST00000555563 ALG1L2C9J202 215 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 ZIC3O60481 467 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 CPSF4O95639 269 aaKnown RBP12.45□□□□□ -0.42
SHMT2-219ENST00000555563 PGRP06401 933 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 TBXA2RP21731 343 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 CHRNB4P30926 498 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 LCN1P31025 176 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 PTGER4P35408 488 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 ADH7P40394 386 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 DSCR4P56555 118 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-219ENST00000555563 PDCD4Q53EL6 469 aaKnown RBP12.45□□□□□ -0.42
SHMT2-219ENST00000555563 DCST2Q5T1A1 773 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 EPGNQ6UW88 154 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 SEM1Q6ZVN7 128 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 C6orf120Q7Z4R8 191 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 CCDC71Q8IV32 467 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-219ENST00000555563 PM20D2Q8IYS1 436 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 GATSQ8NAP1 163 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 DUSP19Q8WTR2 217 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 CA5BP1Q8WTZ4 195 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 WDYHV1Q96HA8 205 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 CCDC115Q96NT0 180 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 ZBTB18Q99592 522 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 SDR39U1Q9NRG7 319 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-219ENST00000555563 ZNF446Q9NWS9 450 aa12.45□□□□□ -0.42
SHMT2-219ENST00000555563 PCNX1Q96RV3 2341 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 NOTCH2Q04721 2471 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 NPIPA5A0A0B4J1W7 369 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 A0A0G2JNJ9 132 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 AHRRA9YTQ3 701 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 NPIPA7E9PJI5 369 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 SCDO00767 359 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 UBDO15205 165 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 NDUFB5O43674 189 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 GMFGO60234 142 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 HOXD4P09016 255 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-219ENST00000555563 NPIPA8P0DM63 369 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 HK1P19367 917 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 ATP6V1C1P21283 382 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 MATN1P21941 496 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 UQCRC2P22695 453 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 CASP9P55211 416 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 B3GALT5-AS1P59052 145 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 C17orf67Q0P5P2 114 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 GANABQ14697 944 aaKnown RBP12.44□□□□□ -0.42
SHMT2-219ENST00000555563 CD226Q15762 336 aa12.44□□□□□ -0.42
SHMT2-219ENST00000555563 GSTA3Q16772 222 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms