RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ACOT1Q86TX2 421 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 PYROXD2Q8N2H3 581 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 CENPSQ8N2Z9 138 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 ALLCQ8N6M5 410 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 BBS1Q8NFJ9 593 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 M1APQ8TC57 530 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 TSEN15Q8WW01 171 aaKnown RBP4.47□□□□□ -1.69
VRK1-203ENST00000555067 ADIPOR1Q96A54 375 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 UPRTQ96BW1 309 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 IL12RB2Q99665 862 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 DCTPP1Q9H773 170 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 GPN2Q9H9Y4 310 aaPredicted RBP4.47□□□□□ -1.69
VRK1-203ENST00000555067 CYP3A43Q9HB55 503 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 MED17Q9NVC6 651 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 GHRLQ9UBU3 117 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 MAN1B1Q9UKM7 699 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 IKZF3Q9UKT9 509 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 MEMO1Q9Y316 297 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 ATP10AO60312 1499 aa4.47□□□□□ -1.69
VRK1-203ENST00000555067 NEDD4P46934 1319 aa4.46□□□□□ -1.69
VRK1-203ENST00000555067 A0A087WZ39 114 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 A0A087X002 238 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 GOLGA8TH3BQL2 631 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 STX7O15400 261 aaKnown RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 CFLARO15519 480 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 LRCH4O75427 683 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 OPN1LWP04000 364 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 IGF1P05019 195 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 CRYGCP07315 174 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 CRYGBP07316 175 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 GSTA1P08263 222 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 CCDC172P0C7W6 258 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 UBTFL6P0CB48 400 aaPredicted RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 POU2F1P14859 743 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 GCFC2P16383 781 aaKnown RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 MAP2K2P36507 400 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 SSR1P43307 286 aaKnown RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 RPS5P46782 204 aaKnown RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 FHITP49789 147 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 LBX1P52954 281 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 C21orf59P57076 290 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 OSTNP61366 133 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 MERTKQ12866 999 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 GANABQ14697 944 aaKnown RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 CHI3L2Q15782 390 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 KIAA1644Q3SXP7 199 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 AGBL2Q5U5Z8 902 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 LIPNQ5VXI9 398 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 UQCC3Q6UW78 93 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 CLEC4FQ8N1N0 589 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 GTPBP8Q8N3Z3 284 aaPredicted RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 ZNF843Q8N446 348 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 FAM89BQ8N5H3 189 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 FAM83FQ8NEG4 500 aaPredicted RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 KBTBD8Q8NFY9 601 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 OR51G2Q8NGK0 314 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 C8orf46Q8TAG6 207 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 LRRC15Q8TF66 581 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 MYLPFQ96A32 169 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 C18orf25Q96B23 403 aaPredicted RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 RPP25Q9BUL9 199 aaKnown RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 TSSK1BQ9BXA7 367 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 MRPL37Q9BZE1 423 aaKnown RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 TRIM15Q9C019 465 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 C3orf14Q9HBI5 128 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 ZNF160Q9HCG1 818 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 AGPAT3Q9NRZ7 376 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 PEF1Q9UBV8 284 aaKnown RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 ELF5Q9UKW6 265 aaPredicted RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 NOSIPQ9Y314 301 aaKnown RBP4.46□□□□□ -1.7
VRK1-203ENST00000555067 NPTNQ9Y639 398 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 KIAA1210Q9ULL0 1709 aa4.46□□□□□ -1.7
VRK1-203ENST00000555067 PNPLA6Q8IY17 1366 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 ACOD1A6NK06 481 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 FAM74A7A6NL05 159 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 LSM1O15116 133 aaKnown RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 ATP6V0E1O15342 81 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 NMT2O60551 498 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 TPST2O60704 377 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 TRIM3O75382 744 aaPredicted RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 CDK2AP2O75956 126 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 KRT33AO76009 404 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 STAMBPO95630 424 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 CST1P01037 141 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 IVLP07476 585 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 ADORA3P0DMS8 318 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 ANXA3P12429 323 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 ETS2P15036 469 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 HNRNPH3P31942 346 aaKnown RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 CASP14P31944 242 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 FEN1P39748 380 aaKnown RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 LEPRP48357 1165 aaKnown RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 DCDC1P59894 354 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 NOP14P78316 857 aaKnown RBP4.45□□□□□ -1.7
VRK1-203ENST00000555067 ITPK1Q13572 414 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 TMEM187Q14656 261 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 NKAIN1Q4KMZ8 207 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 FAM74A3Q4VXF1 159 aa4.45□□□□□ -1.7
VRK1-203ENST00000555067 BEND6Q5SZJ8 279 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms