RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 ADCK2Q7Z695 626 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 GALNT5Q7Z7M9 940 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 BPHLQ86WA6 291 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-216ENST00000554975 SAMD14Q8IZD0 417 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-216ENST00000554975 MMP21Q8N119 569 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 ZADH2Q8N4Q0 377 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 BPIFB6Q8NFQ5 453 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 OR56A1Q8NGH5 318 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 BBS10Q8TAM1 723 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 SLC22A18Q96BI1 424 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 TAMM41Q96BW9 452 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 DCUN1D5Q9BTE7 237 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 MENTQ9BUN1 341 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 SARGQ9BW04 601 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 SLC6A16Q9GZN6 736 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 CCDC90BQ9GZT6 254 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 LHPPQ9H008 270 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 SPNS1Q9H2V7 528 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 MRPS30Q9NP92 439 aaKnown RBP10.34□□□□□ -0.75
SHMT2-216ENST00000554975 IMPAD1Q9NX62 359 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 ACTR10Q9NZ32 417 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 CALML5Q9NZT1 146 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 NDUFAF4Q9P032 175 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 TMCC3Q9ULS5 477 aa10.34□□□□□ -0.75
SHMT2-216ENST00000554975 A0A1W2PPW3 197 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 E9PQ18 207 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 FAAHO00519 579 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 OR1F1O43749 312 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 PRICKLE3O43900 615 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 KLF7O75840 302 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 CLPXO76031 633 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 GADD45GO95257 159 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 NUDT7P0C024 238 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 ST6GAL1P15907 406 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 PRKACGP22612 351 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 AQP1P29972 269 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 XCR1P46094 333 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 ALDH9A1P49189 494 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 CLK3P49761 638 aaKnown RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 PLA2G16P53816 162 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 CDC42P60953 191 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 CSNK1G2P78368 415 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 OLR1P78380 273 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 MEF2AQ02078 507 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 MOGQ16653 247 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF829Q3KNS6 432 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 DCAF10Q5QP82 559 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF385CQ66K41 422 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 TRIM73Q86UV7 250 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 P2RY8Q86VZ1 359 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 RAB43Q86YS6 212 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 ADGRF3Q8IZF5 1079 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 CARFQ8N187 725 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 C2orf73Q8N5S3 287 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF540Q8NDQ6 660 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 OR4C15Q8NGM1 316 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 OR1L3Q8NH93 324 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 MIPOL1Q8TD10 442 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 FAR1Q8WVX9 515 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 S100ZQ8WXG8 99 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 CIDECQ96AQ7 238 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 FKBP10Q96AY3 582 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 CLIP3Q96DZ5 547 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 KCNC2Q96PR1 638 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 ACAT2Q9BWD1 397 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF717Q9BY31 904 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 WDR12Q9GZL7 423 aaKnown RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 RACGAP1Q9H0H5 632 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 CACYBPQ9HB71 228 aaKnown RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 SLC9A8Q9Y2E8 581 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 TESMINQ9Y4I5 508 aa10.33□□□□□ -0.76
SHMT2-216ENST00000554975 KLF2Q9Y5W3 355 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 MAP1AP78559 2803 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-216ENST00000554975 PRRC2AP48634 2157 aaKnown RBP10.32□□□□□ -0.76
SHMT2-216ENST00000554975 A0A0A6YYD5 115 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 A0A1B0GUH1 482 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 A0A1W2PPV9 198 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SH3D21A4FU49 640 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 TMEM150CB9EJG8 249 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 C19orf84I3L1E1 186 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 SAP18O00422 153 aaKnown RBP10.32□□□□□ -0.76
SHMT2-216ENST00000554975 MITFO75030 526 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-216ENST00000554975 ALOX12BO75342 701 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 ATE1O95260 518 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 ALPPP05187 535 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 HTR1AP08908 422 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 CHRM5P08912 532 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-216ENST00000554975 ATXN8OSP0DMR3 200 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 CYP4B1P13584 511 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 COX6B1P14854 86 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 UGT2B7P16662 529 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF10P21506 573 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-216ENST00000554975 PCMT1P22061 227 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 IFNA8P32881 189 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 GPC1P35052 558 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 HMGA2P52926 109 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 CRYBA2P53672 197 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 CRISP3P54108 245 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 UGT2B15P54855 530 aa10.32□□□□□ -0.76
SHMT2-216ENST00000554975 CDH12P55289 794 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms