RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 RNH1P13489 461 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 MAOAP21397 527 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 PRPH2P23942 346 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 IDUAP35475 653 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 CYLC1P35663 651 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 COILP38432 576 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 SOX3P41225 446 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 SKIV2L2P42285 1042 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 DNASE1L1P49184 302 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF136P52737 540 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 HADHBP55084 474 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 ADARP55265 1226 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 EIF3BP55884 814 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 UBASH3AP57075 661 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 OLR1P78380 273 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 TBL3Q12788 808 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 THOC5Q13769 683 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 KPNB1Q14974 876 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 PHKG1Q16816 387 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 TTLL9Q3SXZ7 439 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 DEFB134Q4QY38 66 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 ACSBG2Q5FVE4 666 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 CTSL3PQ5NE16 218 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 NUP210LQ5VU65 1888 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 TMEM88Q6PEY1 159 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 OPN5Q6U736 354 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 HSDL2Q6YN16 418 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 PPP1R21Q6ZMI0 780 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 ABHD13Q7L211 337 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 HIPK1Q86Z02 1210 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 LACC1Q8IV20 430 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 LIX1Q8N485 282 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF740Q8NDX6 193 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 OR8K1Q8NGG5 319 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 OR5L2Q8NGL0 311 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 NCLNQ969V3 563 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 PERPQ96FX8 193 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 RITA1Q96K30 269 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 CCDC42Q96M95 316 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF778Q96MU6 729 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 BIRC8Q96P09 236 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 RASL10BQ96S79 203 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 FAM118BQ9BPY3 351 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 HDHD5Q9BXW7 423 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 OSBPL8Q9BZF1 889 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 SEMA4BQ9NPR2 832 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 CCDC177Q9NQR7 707 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 PNO1Q9NRX1 252 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 QPCTLQ9NXS2 382 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 TUBA8Q9NY65 449 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 MARCH4Q9P2E8 410 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 ZNF223Q9UK11 482 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 HSF4Q9ULV5 492 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 MMACHCQ9Y4U1 282 aa4.42□□□□□ -1.7
ATXN3-228ENST00000554592 SIRT4Q9Y6E7 314 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 FLNAP21333 2647 aaKnown RBP4.42□□□□□ -1.7
ATXN3-228ENST00000554592 HCFC1P51610 2035 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NBEAL1Q6ZS30 2694 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 ATRQ13535 2644 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 SYNDIG1LA6NDD5 238 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 GOLGA6L9A6NEM1 432 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 URADA6NGE7 173 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NPIPB13A6NJU9 1138 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 CD8B2A6NJW9 211 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NPIPB5A8MRT5 1133 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 EEF1E1-BLOC1S5C9J1V9 151 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NPIPB4C9JG80 1138 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 E5RI56 91 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 POC1B-GALNT4F8VUJ3 575 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 WWP2O00308 870 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 RRHO14718 337 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NDUFS4O43181 175 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 EEF1E1O43324 174 aaKnown RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 OR1F1O43749 312 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 TLX2O43763 284 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 PRKNO60260 465 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 CEP104O60308 925 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 TMCC2O75069 709 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NIPSNAP2O75323 286 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 GYPCP04921 128 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 SERPIND1P05546 499 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 MPC1LP0DKB6 136 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 PAX1P15863 534 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 IMPA1P29218 277 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 STIP1P31948 543 aaKnown RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 MARCKSL1P49006 195 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 CCR8P51685 355 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 HSD17B7P56937 341 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 TPM4P67936 248 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 EEF1A1P68104 462 aaKnown RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 RGS1Q08116 209 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 DMTNQ08495 405 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 HNRNPA0Q13151 305 aaKnown RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 KCNJ11Q14654 390 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 ACSF3Q4G176 576 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-228ENST00000554592 EEF1A1P5Q5VTE0 462 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 LIPMQ5VYY2 423 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 SLC22A10Q63ZE4 541 aa4.41□□□□□ -1.7
ATXN3-228ENST00000554592 NSUN5P2Q63ZY6 315 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms