RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 PFDN5Q99471 154 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GPR20Q99678 358 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CENPOQ9BU64 300 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PPA2Q9H2U2 334 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 UTS2RQ9UKP6 389 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PCDHGA11Q9Y5H2 935 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 INO80Q9ULG1 1556 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SHROOM2Q13796 1616 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 A0A0A6YYC8 382 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TRBV11-1A0A0K0K1C0 115 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 KDM4EB2RXH2 506 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 I3L1I5 382 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TIMM8AO60220 97 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RDH16O75452 317 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 C1RP00736 705 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CSTAP01040 98 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GPR4P46093 362 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GSCP56915 257 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 INTS11Q5TA45 600 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 LIPMQ5VYY2 423 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 C12orf40Q86WS4 652 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 METTL25Q8N6Q8 603 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CYB561A3Q8NBI2 242 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 OR1N1Q8NGS0 311 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 LYARQ9NX58 379 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SRRDQ9UH36 339 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TRBV23-1A0A0A0MS06 115 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ADAM12O43184 909 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PPP1R11O60927 126 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CLIC3O95833 236 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 IFNA5P01569 189 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GTF2F2P13984 249 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 AGTR2P50052 363 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 MMP14P50281 582 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 OR1D5P58170 312 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CDK3Q00526 305 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 MFSD6LQ8IWD5 586 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 DENND1AQ8TEH3 1009 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 WNT8BQ93098 351 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CXCL16Q9H2A7 254 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 DPAGT1Q9H3H5 408 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 FN3KRPQ9HA64 309 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 AIREO43918 545 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 LDB3O75112 727 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RBMXP38159 391 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GNA12Q03113 381 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 APOBEC3HQ6NTF7 200 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GFRALQ6UXV0 394 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 BTLAQ7Z6A9 289 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TMPRSS12Q86WS5 348 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GABRG1Q8N1C3 465 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 FANK1Q8TC84 345 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CMBLQ96DG6 245 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ATF6BQ99941 703 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 MRPL57Q9BQC6 102 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ASB6Q9NWX5 421 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 C2orf16Q68DN1 1984 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 BET1O15155 118 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 DIRAS3O95661 229 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 IGKV3-20P01619 116 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CD2P06729 351 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 MMP7P09237 267 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PRKCAP17252 672 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CDK7P50613 346 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ELP6Q0PNE2 266 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SPINK9Q5DT21 86 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 OR2T12Q8NG77 320 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ZDHHC1Q8WTX9 485 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SLC38A4Q969I6 547 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 FUBP1Q96AE4 644 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 DAZAP1Q96EP5 407 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 C2orf42Q9NWW7 574 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 FZD4Q9ULV1 537 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RAB26Q9ULW5 256 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RPS10-NUDT3A0A1W2PQS6 291 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 CBY3A6NI87 242 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 B4GALT4O60513 344 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 NUDT3O95989 172 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 HLA-DQB2P05538 268 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GYPBP06028 91 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 FECHP22830 423 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TPTEP56180 551 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 NPTX1Q15818 432 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GPRC6AQ5T6X5 926 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ANKRD16Q6P6B7 361 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 PQLC1Q8N2U9 271 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 ASB13Q8WXK3 278 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 FUCA2Q9BTY2 467 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 GPR52Q9Y2T5 361 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 OR52A4PA6NMU1 304 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TOR1AO14656 332 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SNRNP70P08621 437 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 POU3F2P20265 443 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 STEAP4Q687X5 459 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 KDM8Q8N371 416 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RBP7Q96R05 134 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 RBM4Q9BWF3 364 aaKnown RBP3.13□□□□□ -1.91
SYNE2-212ENST00000554584 TGIF2Q9GZN2 237 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 MAF1Q9H063 256 aa3.13□□□□□ -1.91
SYNE2-212ENST00000554584 SMCO4Q9NRQ5 59 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms