RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 GJB4Q9NTQ9 266 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ABHD10Q9NUJ1 306 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 POT1Q9NUX5 634 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TMEM216Q9P0N5 145 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 MYEF2Q9P2K5 600 aaKnown RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TRPC4Q9UBN4 977 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 CDH22Q9UJ99 828 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 TSPAN16Q9UKR8 245 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 ELF5Q9UKW6 265 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 FZD10Q9ULW2 581 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 MAGED2Q9UNF1 606 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 KCNJ14Q9UNX9 436 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 PCDHB7Q9Y5E2 793 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 AP4B1Q9Y6B7 739 aa4.13□□□□□ -1.75
ATXN3-227ENST00000554491 FNDC1Q4ZHG4 1894 aaPredicted RBP4.13□□□□□ -1.75
ATXN3-227ENST00000554491 A0A087WV62 115 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 A0A087WWV3 80 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 PLSCR5A0PG75 271 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SLC5A10A0PJK1 596 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 FAM234BA2RU67 622 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 BTBD17A6NE02 478 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 CBY3A6NI87 242 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 PRSS29PA6NIE9 313 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 DNASE2O00115 360 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 FOXE1O00358 373 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 NR5A2O00482 541 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 PPP6CO00743 305 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 STX16O14662 325 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 TPP1O14773 563 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 STX7O15400 261 aaKnown RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 DLEU1O43261 78 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 LIASO43766 372 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SLC28A2O43868 658 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF821O75541 412 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 PRDM1O75626 825 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 UPK1BO75841 260 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 OR2B3O76000 313 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 KCNK2O95069 426 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 C22orf31O95567 290 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 IGHEP01854 428 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 FGGP02679 453 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 PPBPP02775 128 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 RLN2P04090 185 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 OR2T7P0C7T2 308 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 BRAFP15056 766 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 MUC1P15941 1255 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 LBPP18428 481 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 MATN1P21941 496 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 EPHA8P29322 1005 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 CORO1AP31146 461 aaKnown RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 NNMTP40261 264 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 OPRL1P41146 370 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SLC16A1P53985 500 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SLC18A1P54219 525 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 EMP2P54851 167 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 ARL4CP56559 192 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 RAB25P57735 213 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 ABCE1P61221 599 aaKnown RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 DYNLL1P63167 89 aaKnown RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 MRPS11P82912 194 aaKnown RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SORDQ00796 357 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 IL9RQ01113 521 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SP2Q02086 613 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 TNFRSF17Q02223 184 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 GABPAQ06546 454 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 TNFRSF9Q07011 255 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 BIKQ13323 160 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 TRA2AQ13595 282 aaKnown RBP eCLIP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 DNASE1L3Q13609 305 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SLC12A1Q13621 1099 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 HEPACAMQ14CZ8 416 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 PDK1Q15118 436 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 GPR68Q15743 365 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SLC1A5Q15758 541 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 NPY5RQ15761 445 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 MGAT5BQ3V5L5 792 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 PLA1AQ53H76 456 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 RNASE10Q5GAN6 216 aaKnown RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 RABGAP1LQ5R372 815 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SPATA46Q5T0L3 261 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 C6orf52Q5T4I8 152 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 RRAGBQ5VZM2 374 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 ETFRF1Q6IPR1 90 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 KRT80Q6KB66 452 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SLC18B1Q6NT16 456 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 TMEM71Q6P5X7 295 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SPNS3Q6ZMD2 512 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 TMEM26Q6ZUK4 368 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 SLC16A14Q7RTX9 510 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 RBM23Q86U06 439 aaKnown RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 TRABD2AQ86V40 505 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 MYPOPQ86VE0 399 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-227ENST00000554491 NUDT13Q86X67 352 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 TUSC5Q8IXB3 177 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 RDH10Q8IZV5 341 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 BLIDQ8IZY5 108 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 GPR137CQ8N3F9 429 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 ARRDC1Q8N5I2 433 aa4.12□□□□□ -1.75
ATXN3-227ENST00000554491 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms