RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ERAL1O75616 437 aaKnown RBP5.85□□□□□ -1.47
SCFD1-212ENST00000554486 KRT34O76011 436 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 CBX6O95503 412 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 GPR75O95800 540 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 IL6P05231 212 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 UMODP07911 640 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 ADH4P08319 380 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 C8orf89P0DMQ9 161 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 T-ENOLP0DO92 83 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 COX4I1P13073 169 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 MAOAP21397 527 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 F8A1P23610 371 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 CD82P27701 267 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 PRDX6P30041 224 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 PPP2R1BP30154 601 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 PTGER1P34995 402 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 FEN1P39748 380 aaKnown RBP5.85□□□□□ -1.47
SCFD1-212ENST00000554486 XKP51811 444 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 KCNK10P57789 538 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 IGLV3-21P80748 117 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-212ENST00000554486 FOLH1Q04609 750 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 KRT72Q14CN4 511 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 NCF4Q15080 339 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 CEBPEQ15744 281 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 VPS26BQ4G0F5 336 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 TIGD2Q4W5G0 525 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 PAGE3Q5JUK9 113 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 FAM69BQ5VUD6 431 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 OR4F3Q6IEY1 312 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 QSOX2Q6ZRP7 698 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 SHISA6Q6ZSJ9 500 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 MSANTD1Q6ZTZ1 278 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 MRGPREQ86SM8 312 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 ANKRD46Q86W74 232 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 CLECL1Q8IZS7 167 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 ESX1Q8N693 406 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 PSD4Q8NDX1 1056 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 OR4K14Q8NGD5 310 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 SUN3Q8TAQ9 357 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 STARD8Q92502 1023 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 TSLPQ969D9 159 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 KLHL29Q96CT2 875 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 NMD3Q96D46 503 aaKnown RBP5.85□□□□□ -1.47
SCFD1-212ENST00000554486 NXPE2Q96DL1 559 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 BOD1Q96IK1 185 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 AMDHD1Q96NU7 426 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 OR52E6Q96RD3 313 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 PRPF18Q99633 342 aaKnown RBP5.85□□□□□ -1.47
SCFD1-212ENST00000554486 MESP1Q9BRJ9 268 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 INPP5KQ9BT40 448 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 SLC25A23Q9BV35 468 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 DUSP26Q9BV47 211 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 CNPPD1Q9BV87 410 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 SPATA5L1Q9BVQ7 753 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 TRIM4Q9C037 500 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 GLIPR2Q9H4G4 154 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 WDR54Q9H977 334 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 SERHLQ9NQF3 203 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 PRTFDC1Q9NRG1 225 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 C14orf105Q9NVL8 296 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 FAM120CQ9NX05 1096 aaKnown RBP5.85□□□□□ -1.47
SCFD1-212ENST00000554486 PSME2Q9UL46 239 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 MRPS33Q9Y291 106 aaKnown RBP5.85□□□□□ -1.47
SCFD1-212ENST00000554486 NEUROG3Q9Y4Z2 214 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 MED13Q9UHV7 2174 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 DMXL2Q8TDJ6 3036 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 PRSS51A0A1B0GVH4 220 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 A0A1W2PP18 115 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 A0A1W2PRB8 838 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 IDSB3KWA1 339 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 CLDN4O14493 209 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 KLF7O75840 302 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 SPDEFO95238 335 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 C6orf47O95873 294 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 GRPP07492 148 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 HEXBP07686 556 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 RAB40ALP0C0E4 278 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 CPMP14384 443 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 PORP16435 677 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 HOXB9P17482 250 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 CSNK2A2P19784 350 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 TCN2P20062 427 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 PTPN4P29074 926 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 PTPN6P29350 595 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 NTSP30990 170 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 CDKN2CP42773 168 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 CPA2P48052 419 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 EMP2P54851 167 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 HSD17B7P56937 341 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 RPS18P62269 152 aaKnown RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 PLIN5Q00G26 463 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 SLC13A2Q13183 592 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 DNASE1L3Q13609 305 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 CYLC2Q14093 348 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-212ENST00000554486 MAPRE2Q15555 327 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 TGIF1Q15583 401 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 LTB4RQ15722 352 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 TBC1D25Q3MII6 688 aa5.84□□□□□ -1.47
SCFD1-212ENST00000554486 GTDC1Q4AE62 458 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms