RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 DUX1O43812 170 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 PEX11AO75192 247 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 TRIM3O75382 744 aaPredicted RBP2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 IDH1O75874 414 aaKnown RBP2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 DUSP14O95147 198 aaKnown RBP2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 MBD3O95983 291 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 EPB41P11171 864 aaKnown RBP2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 ATP5A1P25705 553 aaKnown RBP2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 PRKAR2BP31323 418 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 ACAA2P42765 397 aaKnown RBP2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 MAGEA5P43359 124 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 NOVA1P51513 510 aaKnown RBP2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 CXCL6P80162 114 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 RGS1Q08116 209 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 CHI3L2Q15782 390 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 USH1GQ495M9 461 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 DCST2Q5T1A1 773 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 ASPHD2Q6ICH7 369 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 SULT1C3Q6IMI6 304 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 LANCL3Q6ZV70 420 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 DPY19L4Q7Z388 723 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 ZBED8Q8IZ13 594 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 FADS6Q8N9I5 356 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 THRSPQ92748 146 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 SYAP1Q96A49 352 aaPredicted RBP2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 VPS39Q96JC1 886 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 SLC30A2Q9BRI3 323 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 FEM1AQ9BSK4 669 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 TSSK1BQ9BXA7 367 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 POLR3FQ9H1D9 316 aaPredicted RBP2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 RIBC2Q9H4K1 309 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 SLC7A10Q9NS82 523 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 EHFQ9NZC4 300 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 CYTH4Q9UIA0 394 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 DUSP12Q9UNI6 340 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 GMPPBQ9Y5P6 360 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 MMP24Q9Y5R2 645 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 USP6P35125 1406 aa2.76□□□□□ -1.97
EFCAB11-204ENST00000553871 GSAPA4D1B5 854 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 ZSCAN5BA6NJL1 495 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 A8MUI8 341 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 E9PLD3 99 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 SDHDO14521 159 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 PHOX2AO14813 284 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 NOL4O94818 638 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 PCCBP05166 539 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 ASNSP08243 561 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 TSPY4P0CV99 314 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 TSPY10P0CW01 314 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 KRT13P13646 458 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 HTR2AP28223 471 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 IL2RGP31785 369 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 DHPSP49366 369 aaPredicted RBP2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 RGS19P49795 217 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 ASAH1Q13510 395 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 GLYR1Q49A26 553 aaPredicted RBP2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 DNAJC21Q5F1R6 531 aaKnown RBP2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 ZNF57Q68EA5 555 aaPredicted RBP2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 BLOC1S2Q6QNY1 142 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 CBLN3Q6UW01 205 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 ANKRD37Q7Z713 158 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 TEX9Q8N6V9 391 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 CSNK1A1LQ8N752 337 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 CNIH3Q8TBE1 160 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 GTSF1Q8WW33 167 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 TRUB1Q8WWH5 349 aaKnown RBP2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 IL1F10Q8WWZ1 152 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 RSPH1Q8WYR4 309 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 TMEM80Q96HE8 168 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 CASD1Q96PB1 797 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 TMEM121Q9BTD3 319 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 MRPL13Q9BYD1 178 aaKnown RBP2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 CRNKL1Q9BZJ0 848 aaKnown RBP2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 PNO1Q9NRX1 252 aaKnown RBP2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 MRPL39Q9NYK5 338 aaKnown RBP2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 EPS15L1Q9UBC2 864 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 LAMP5Q9UJQ1 280 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 VSIG4Q9Y279 399 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 MAD1L1Q9Y6D9 718 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 CUX2O14529 1486 aa2.75□□□□□ -1.97
EFCAB11-204ENST00000553871 CARMIL1Q5VZK9 1371 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 SF3B1O75533 1304 aaKnown RBP eCLIP2.74□□□□□ -1.972e-6■■■■■ 120.6
EFCAB11-204ENST00000553871 IGLV3-10A0A075B6K4 115 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 PPIAL4CA0A0B4J2A2 164 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 SAGE2PA6NJ88 616 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 NDC80O14777 642 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 STX7O15400 261 aaKnown RBP2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 CD55P08174 381 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 PPIAL4GP0DN37 164 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 IGHV1-2P23083 117 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 CDH5P33151 784 aaPredicted RBP2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 MDH2P40926 338 aaKnown RBP2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 KRTAP10-6P60371 365 aaPredicted RBP2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 RND3P61587 244 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 KLHL30Q0D2K2 578 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 ATXN7L3Q14CW9 347 aaPredicted RBP2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 PAN3Q58A45 887 aaKnown RBP2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 PAGE2BQ5JRK9 111 aa2.74□□□□□ -1.97
EFCAB11-204ENST00000553871 CELF3Q5SZQ8 465 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms