RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 TMEM89A2RUT3 159 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 PDXKO00764 312 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 PPIHO43447 177 aaKnown RBP2.11□□□□□ -2.07
VRK1-202ENST00000553683 ZBTB14O43829 449 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 MMP23AO75900 390 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 OLFM2O95897 454 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 JCHAINP01591 159 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 IGHDP01880 384 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 ASNSP08243 561 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 ZNF853P0CG23 659 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 CYP11B1P15538 503 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 ZNF32P17041 273 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 PEX19P40855 299 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 OR3A4PP47883 348 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 SRP54P61011 504 aaKnown RBP2.11□□□□□ -2.07
VRK1-202ENST00000553683 BCL2L1Q07817 233 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 C17orf67Q0P5P2 114 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 SNX1Q13596 522 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 DPYSL3Q14195 570 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 MPPED2Q15777 294 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 HFEQ30201 348 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 C1QTNF12Q5T7M4 302 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 LIPKQ5VXJ0 399 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 WSCD1Q658N2 575 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 ETFRF1Q6IPR1 90 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 Q6P435 159 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 CXCL17Q6UXB2 119 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 BTNL3Q6UXE8 466 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 DNM1P46Q6ZS02 220 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 MIER3Q7Z3K6 550 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 NBPF5PQ86XG9 351 aaPredicted RBP2.11□□□□□ -2.07
VRK1-202ENST00000553683 ENTHD1Q8IYW4 607 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 BATF2Q8N1L9 274 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 BPIFB2Q8N4F0 458 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 ARFGAP2Q8N6H7 521 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 DHTKD1Q96HY7 919 aaPredicted RBP2.11□□□□□ -2.07
VRK1-202ENST00000553683 CABS1Q96KC9 395 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 RSPH9Q9H1X1 276 aaPredicted RBP2.11□□□□□ -2.07
VRK1-202ENST00000553683 NANOGQ9H9S0 305 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 POLD4Q9HCU8 107 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 CWC25Q9NXE8 425 aaPredicted RBP2.11□□□□□ -2.07
VRK1-202ENST00000553683 ANKMY1Q9P2S6 941 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 SPRR3Q9UBC9 169 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 DCDC2Q9UHG0 476 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.11□□□□□ -2.07
VRK1-202ENST00000553683 ERCC6Q03468 1493 aa2.11□□□□□ -2.07
VRK1-202ENST00000553683 ANP32DO95626 131 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 HPNP05981 417 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 FUT3P21217 361 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 KIR2DS2P43631 304 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 GPC3P51654 580 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 MRPS11P82912 194 aaKnown RBP2.1□□□□□ -2.07
VRK1-202ENST00000553683 GFPT1Q06210 699 aaPredicted RBP2.1□□□□□ -2.07
VRK1-202ENST00000553683 ACTN3Q08043 901 aaPredicted RBP2.1□□□□□ -2.07
VRK1-202ENST00000553683 EGFEM1PQ0D2K5 195 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 LASP1Q14847 261 aaKnown RBP2.1□□□□□ -2.07
VRK1-202ENST00000553683 CDC37Q16543 378 aaPredicted RBP2.1□□□□□ -2.07
VRK1-202ENST00000553683 CFAP221Q4G0U5 840 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 TMEM184AQ6ZMB5 413 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 HSD17B13Q7Z5P4 300 aaPredicted RBP2.1□□□□□ -2.07
VRK1-202ENST00000553683 SPC24Q8NBT2 197 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 NFAM1Q8NET5 270 aaPredicted RBP2.1□□□□□ -2.07
VRK1-202ENST00000553683 OR10H4Q8NGA5 316 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 OR9A1PQ8NGU1 263 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 RSPH1Q8WYR4 309 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 TAF4BQ92750 862 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 ART4Q93070 314 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 NEIL2Q969S2 332 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 NCLNQ969V3 563 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 ADIPOR1Q96A54 375 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 TADA1Q96BN2 335 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 MYCBPQ99417 103 aaPredicted RBP2.1□□□□□ -2.07
VRK1-202ENST00000553683 NMNAT2Q9BZQ4 307 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 SIRPDQ9H106 197 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 APMAPQ9HDC9 416 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 MARCH5Q9NX47 278 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 ZNF221Q9UK13 617 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 NOL7Q9UMY1 257 aaKnown RBP2.1□□□□□ -2.07
VRK1-202ENST00000553683 PARD3Q8TEW0 1356 aa2.1□□□□□ -2.07
VRK1-202ENST00000553683 RSPH10B2B2RC85 870 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 C19orf81C9J6K1 198 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 VEGFDO43915 354 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 CA11O75493 328 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 RSPH10BP0C881 870 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 RALAP11233 206 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 HLA-DPA1P20036 260 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 CCNA2P20248 432 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 PTBP1P26599 531 aaKnown RBP eCLIP2.09□□□□□ -2.07
VRK1-202ENST00000553683 BTDP43251 543 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 ZNF154Q13106 437 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 UBE2V2Q15819 145 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 KCTD19Q17RG1 926 aaPredicted RBP2.09□□□□□ -2.07
VRK1-202ENST00000553683 NEK5Q6P3R8 708 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 TAF8Q7Z7C8 310 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 ADAMTSL2Q86TH1 951 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 ZNF100Q8IYN0 542 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 OR2A12Q8NGT7 310 aa2.09□□□□□ -2.07
VRK1-202ENST00000553683 DQX1Q8TE96 717 aaKnown RBP2.09□□□□□ -2.07
VRK1-202ENST00000553683 SRSF12Q8WXF0 261 aaKnown RBP2.09□□□□□ -2.07
VRK1-202ENST00000553683 KRT35Q92764 455 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms