RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ZNF614Q8N883 585 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 RNF6Q9Y252 685 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 NUP210LQ5VU65 1888 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 TCRBV16S1A1N1A0A5B0 115 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 CDHR4A6H8M9 788 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 PTGES3LE9PB15 166 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 WBP4O75554 376 aaKnown RBP18.23■□□□□ 0.51
SSH1-209ENST00000551165 DDAH2O95865 285 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 MMP11P24347 488 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 POU1F1P28069 291 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 GGT2P36268 569 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 ALDH3B2P48448 385 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 PTGES3Q15185 160 aaKnown RBP18.23■□□□□ 0.51
SSH1-209ENST00000551165 APOL4Q9BPW4 351 aa18.23■□□□□ 0.51
SSH1-209ENST00000551165 YTHDF1Q9BYJ9 559 aaKnown RBP18.23■□□□□ 0.51
SSH1-209ENST00000551165 ADAM11O75078 769 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 ANGPTL1O95841 491 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 AK1P00568 194 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 IDH2P48735 452 aaKnown RBP18.22■□□□□ 0.51
SSH1-209ENST00000551165 SMIM11AP58511 58 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 TUBA4AP68366 448 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 RBM48Q5RL73 367 aaKnown RBP18.22■□□□□ 0.51
SSH1-209ENST00000551165 LCN10Q6JVE6 187 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 SETD9Q8NE22 299 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 FAM81AQ8TBF8 368 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 SLC2A12Q8TD20 617 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 ZNF721Q8TF20 911 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 CNOT9Q92600 299 aaKnown RBP18.22■□□□□ 0.51
SSH1-209ENST00000551165 UCK2Q9BZX2 261 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 TRIM45Q9H8W5 580 aaPredicted RBP18.22■□□□□ 0.51
SSH1-209ENST00000551165 AKIRIN1Q9H9L7 192 aaPredicted RBP18.22■□□□□ 0.51
SSH1-209ENST00000551165 FTSJ1Q9UET6 329 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 RARRES3Q9UL19 164 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 LNP1A1A4G5 178 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 FAM86C2PA6NEL3 165 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 D6RAR5 112 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 AP3D1O14617 1153 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 OXSR1O95747 527 aaPredicted RBP18.22■□□□□ 0.51
SSH1-209ENST00000551165 ADAP00813 363 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 GALNSP34059 522 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 RBM44Q6ZP01 1051 aaKnown RBP18.22■□□□□ 0.51
SSH1-209ENST00000551165 PLEKHM3Q6ZWE6 761 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 PRICKLE2Q7Z3G6 844 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 GDF7Q7Z4P5 450 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 PARP8Q8N3A8 854 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 BCORP1Q8N888 145 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 STT3BQ8TCJ2 826 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 NUDT9Q9BW91 350 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 CLCA3PQ9Y6N3 262 aa18.22■□□□□ 0.51
SSH1-209ENST00000551165 IGHV3-20A0A0C4DH32 117 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 NTN3O00634 580 aaPredicted RBP18.21■□□□□ 0.51
SSH1-209ENST00000551165 IGKV3-11P04433 115 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 TP53P04637 393 aaPredicted RBP18.21■□□□□ 0.51
SSH1-209ENST00000551165 YOD1Q5VVQ6 348 aaPredicted RBP18.21■□□□□ 0.51
SSH1-209ENST00000551165 CCDC103Q8IW40 242 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 OR4C3Q8NH37 302 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 ZNF578Q96N58 590 aaPredicted RBP18.21■□□□□ 0.51
SSH1-209ENST00000551165 PELOQ9BRX2 385 aaKnown RBP18.21■□□□□ 0.51
SSH1-209ENST00000551165 NRSN2Q9GZP1 204 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 CACYBPQ9HB71 228 aaKnown RBP18.21■□□□□ 0.51
SSH1-209ENST00000551165 Q9N2J8 555 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 MKKSQ9NPJ1 570 aaPredicted RBP18.21■□□□□ 0.51
SSH1-209ENST00000551165 ZNF226Q9NYT6 803 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 FLRT3Q9NZU0 649 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 CBLCQ9ULV8 474 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 SRPK3Q9UPE1 567 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 MGAT4BQ9UQ53 548 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 OR10H1Q9Y4A9 318 aa18.21■□□□□ 0.51
SSH1-209ENST00000551165 CRISP1P54107 249 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 NKAIN1Q4KMZ8 207 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 AP1ARQ63HQ0 302 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 DESI1Q6ICB0 168 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 KCTD8Q6ZWB6 473 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 EFHD2Q96C19 240 aaPredicted RBP18.2■□□□□ 0.5
SSH1-209ENST00000551165 SLC41A3Q96GZ6 507 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 NXF5Q9H1B4 397 aaKnown RBP18.2■□□□□ 0.5
SSH1-209ENST00000551165 H3BSA7 217 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 KHNYNO15037 678 aaKnown RBP18.2■□□□□ 0.5
SSH1-209ENST00000551165 NDUFAF6Q330K2 333 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 TMEM255BQ8WV15 326 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 PMEPA1Q969W9 287 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 FAM192AQ9GZU8 254 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 RBM38Q9H0Z9 239 aaKnown RBP18.2■□□□□ 0.5
SSH1-209ENST00000551165 TUBA8Q9NY65 449 aaPredicted RBP18.2■□□□□ 0.5
SSH1-209ENST00000551165 SLC7A7Q9UM01 511 aa18.2■□□□□ 0.5
SSH1-209ENST00000551165 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.19■□□□□ 0.5
SSH1-209ENST00000551165 OSMP13725 252 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 KRT20P35900 424 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 UGT2B15P54855 530 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 PMS2P3Q13401 168 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 TRAM2Q15035 370 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 ELAVL1Q15717 326 aaKnown RBP18.19■□□□□ 0.5
SSH1-209ENST00000551165 EIPR1Q53HC9 387 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 ZNF773Q6PK81 442 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 WDR88Q6ZMY6 472 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 DGCR6LQ9BY27 220 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 POLR2J3Q9H1A7 115 aaKnown RBP18.19■□□□□ 0.5
SSH1-209ENST00000551165 POLE3Q9NRF9 147 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 CNIH4Q9P003 139 aa18.19■□□□□ 0.5
SSH1-209ENST00000551165 HSPE1-MOB4S4R3N1 261 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms