RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 KHKP50053 298 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 ATP4BP51164 291 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 RCAN2Q14206 197 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.52□□□□□ -0.41
TROAP-213ENST00000550709 COX20Q5RI15 118 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 ATAD3BQ5T9A4 648 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 MSANTD1Q6ZTZ1 278 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 DOLPP1Q86YN1 238 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 ZNF614Q8N883 585 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 FAM83FQ8NEG4 500 aaPredicted RBP12.52□□□□□ -0.41
TROAP-213ENST00000550709 MIPOL1Q8TD10 442 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 RNF138Q8WVD3 245 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 STON2Q8WXE9 905 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 GTF2H4Q92759 462 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 AURKBQ96GD4 344 aaPredicted RBP12.52□□□□□ -0.41
TROAP-213ENST00000550709 ZNF317Q96PQ6 595 aaPredicted RBP12.52□□□□□ -0.41
TROAP-213ENST00000550709 SDF2Q99470 211 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 UBQLN3Q9H347 655 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 RABEP2Q9H5N1 569 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 ACKR4Q9NPB9 350 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 SDHAF3Q9NRP4 125 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 UBQLN4Q9NRR5 601 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 QPCTLQ9NXS2 382 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 ALKBH4Q9NXW9 302 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 SPRR3Q9UBC9 169 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 DKKL1Q9UK85 242 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 UBR5O95071 2799 aaPredicted RBP12.52□□□□□ -0.41
TROAP-213ENST00000550709 TENM4Q6N022 2769 aa12.52□□□□□ -0.41
TROAP-213ENST00000550709 A0A1B0GUH1 482 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 A0A1B0GVC2 190 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 B4DXG7 233 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 SCDO00767 359 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 AQP7O14520 342 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 ADAM10O14672 748 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 NDUFB5O43674 189 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 SUSD5O60279 629 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 HCN1O60741 890 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 SOX30O94993 753 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 ANGPTL1O95841 491 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 HPNP05981 417 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 RNF224P0DH78 156 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 ESRRAP11474 423 aaPredicted RBP12.51□□□□□ -0.41
TROAP-213ENST00000550709 ENDOUP21128 410 aaKnown RBP12.51□□□□□ -0.41
TROAP-213ENST00000550709 FLYWCH1Q4VC44 716 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.51□□□□□ -0.41
TROAP-213ENST00000550709 Q6ZPB1 254 aaPredicted RBP12.51□□□□□ -0.41
TROAP-213ENST00000550709 OR14L1PQ8NHC6 308 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 NEIL3Q8TAT5 605 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 FAM57AQ8TBR7 257 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 SH3YL1Q96HL8 342 aaPredicted RBP12.51□□□□□ -0.41
TROAP-213ENST00000550709 PHF12Q96QT6 1004 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 FAM107BQ9H098 131 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 EXD2Q9NVH0 621 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 TAS2R10Q9NYW0 307 aa12.51□□□□□ -0.41
TROAP-213ENST00000550709 RPH3AQ9Y2J0 694 aaPredicted RBP12.51□□□□□ -0.41
TROAP-213ENST00000550709 COL12A1Q99715 3063 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 CLEC18AA5D8T8 446 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 ALG1L2C9J202 215 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 HMGN4O00479 90 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 FCMRO60667 390 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 STX11O75558 287 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 KRT75O95678 551 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 AGR2O95994 175 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 NGFRP08138 427 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 DPP4P27487 766 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 LCN1P31025 176 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 DCTP40126 519 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 CRATP43155 626 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 SEC24CP53992 1094 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 IRX1P78414 480 aaPredicted RBP12.5□□□□□ -0.41
TROAP-213ENST00000550709 C17orf67Q0P5P2 114 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 GPR68Q15743 365 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 GXYLT1Q4G148 440 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 GPAT3Q53EU6 434 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 PAGE3Q5JUK9 113 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 METTL21CQ5VZV1 264 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 ZNF585AQ6P3V2 769 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 CLEC18BQ6UXF7 455 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 NCCRP1Q6ZVX7 275 aaPredicted RBP12.5□□□□□ -0.41
TROAP-213ENST00000550709 HMGN2P46Q86SG4 172 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 CLEC18CQ8NCF0 446 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 CHDHQ8NE62 594 aaPredicted RBP12.5□□□□□ -0.41
TROAP-213ENST00000550709 OR2M3Q8NG83 312 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 ZFP90Q8TF47 636 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 RELTQ969Z4 430 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 SARAFQ96BY9 339 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 HOXD1Q9GZZ0 328 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 PAIP1Q9H074 479 aaKnown RBP12.5□□□□□ -0.41
TROAP-213ENST00000550709 ZNF385DQ9H6B1 395 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 TPT1P8Q9HAU6 139 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 SLC52A3Q9NQ40 469 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 PNPLA3Q9NST1 481 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 SLAMF8Q9P0V8 285 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 MKLN1Q9UL63 735 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 PCDHB14Q9Y5E9 798 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 NUP214P35658 2090 aaPredicted RBP12.5□□□□□ -0.41
TROAP-213ENST00000550709 NINQ8N4C6 2090 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 ZGRF1Q86YA3 2104 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 FLNCQ14315 2725 aa12.5□□□□□ -0.41
TROAP-213ENST00000550709 A0A096LPI6 279 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms