RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TAAR6Q96RI8 345 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 G6PC3Q9BUM1 346 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 GALNT9Q9HCQ5 603 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 A4GALTQ9NPC4 353 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 TUBA8Q9NY65 449 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-206ENST00000550406 CNIH4Q9P003 139 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 LIPT1Q9Y234 373 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 NTNG1Q9Y2I2 539 aa11.94□□□□□ -0.5
RAB5C-206ENST00000550406 KLF13Q9Y2Y9 288 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-206ENST00000550406 BOD1L1Q8NFC6 3051 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 PRAMEF25A6NGN4 478 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 SLC28A2O43868 658 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 STX11O75558 287 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 GCM2O75603 506 aaPredicted RBP11.93□□□□□ -0.5
RAB5C-206ENST00000550406 UGT2B17O75795 530 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 PRB1P04280 392 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 BCHEP06276 602 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 NGFRP08138 427 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 NR2F1P10589 423 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
RAB5C-206ENST00000550406 LCN1P31025 176 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 EVI2BP34910 448 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 MEOX1P50221 254 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 ATP12AP54707 1039 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 SLC25A3Q00325 362 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 NFATC3Q12968 1075 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 GPR68Q15743 365 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 FLYWCH1Q4VC44 716 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 GPAT3Q53EU6 434 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 KLHL26Q53HC5 615 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 RPS26P11Q5JNZ5 115 aaPredicted RBP11.93□□□□□ -0.5
RAB5C-206ENST00000550406 GCNT6Q5T4J0 391 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 RINLQ6ZS11 566 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 HMGN2P46Q86SG4 172 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 MARCH3Q86UD3 253 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 TMEM178AQ8NBL3 297 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 TMEM19Q96HH6 336 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 FRMD6Q96NE9 622 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 HOPXQ9BPY8 73 aaPredicted RBP11.93□□□□□ -0.5
RAB5C-206ENST00000550406 QRSL1Q9H0R6 528 aaKnown RBP11.93□□□□□ -0.5
RAB5C-206ENST00000550406 PIF1Q9H611 641 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 TMEM38AQ9H6F2 299 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 P2RX2Q9UBL9 471 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 CORO2BQ9UQ03 480 aa11.93□□□□□ -0.5
RAB5C-206ENST00000550406 SHANK1Q9Y566 2161 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 LRRC3CA6NJW4 275 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 B2RBV5 119 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 ALG1L2C9J202 215 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 KLRC4-KLRK1H3BQV0 150 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 KIAA0513O60268 411 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 C1QL1O75973 258 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 GLSO94925 669 aaPredicted RBP11.92□□□□□ -0.5
RAB5C-206ENST00000550406 RPS4Y1P22090 263 aaKnown RBP11.92□□□□□ -0.5
RAB5C-206ENST00000550406 DCTP40126 519 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 RFC3P40938 356 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 RNF144AP50876 292 aaPredicted RBP11.92□□□□□ -0.5
RAB5C-206ENST00000550406 ANXA11P50995 505 aaKnown RBP11.92□□□□□ -0.5
RAB5C-206ENST00000550406 SLC7A2P52569 658 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 CDK6Q00534 326 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 PLAURQ03405 335 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 SNTA1Q13424 505 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 ZNF141Q15928 474 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 PRR30Q53SZ7 412 aaPredicted RBP11.92□□□□□ -0.5
RAB5C-206ENST00000550406 SLC30A6Q6NXT4 461 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 SERPINA11Q86U17 422 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 ZNF619Q8N2I2 560 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 WDSUB1Q8N9V3 476 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 ZFP62Q8NB50 900 aaPredicted RBP11.92□□□□□ -0.5
RAB5C-206ENST00000550406 NFKBIDQ8NI38 313 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 TMEM41AQ96HV5 264 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 SH3GL1Q99961 368 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 TREX2Q9BQ50 279 aaPredicted RBP11.92□□□□□ -0.5
RAB5C-206ENST00000550406 KLHDC3Q9BQ90 382 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 FAM173AQ9BQD7 235 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 OSBPL11Q9BXB4 747 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 METTL7AQ9H8H3 244 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 BCL2L10Q9HD36 194 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 POLE3Q9NRF9 147 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 UBQLN4Q9NRR5 601 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 THUMPD1Q9NXG2 353 aaKnown RBP11.92□□□□□ -0.5
RAB5C-206ENST00000550406 ABCD2Q9UBJ2 740 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 ABCG2Q9UNQ0 655 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 WDR45Q9Y484 360 aa11.92□□□□□ -0.5
RAB5C-206ENST00000550406 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.92□□□□□ -0.5
RAB5C-206ENST00000550406 TLN1Q9Y490 2541 aaKnown RBP11.92□□□□□ -0.5
RAB5C-206ENST00000550406 SPENQ96T58 3664 aaKnown RBP11.91□□□□□ -0.5
RAB5C-206ENST00000550406 DSPPQ9NZW4 1301 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 OIP5O43482 229 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 SCO2O43819 266 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 HS6ST1O60243 411 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 BCAS1O75363 584 aaPredicted RBP11.91□□□□□ -0.5
RAB5C-206ENST00000550406 PGM3O95394 542 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 RFPL3SP0C7P2 107 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 ATP6V1C1P21283 382 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 CALB2P22676 271 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 RPP38P78345 283 aaKnown RBP11.91□□□□□ -0.5
RAB5C-206ENST00000550406 SCARB2Q14108 478 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 CD226Q15762 336 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 TBCELQ5QJ74 424 aa11.91□□□□□ -0.5
RAB5C-206ENST00000550406 PDZK1Q5T2W1 519 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms