RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 KRT6AP02538 564 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 KRT6BP04259 564 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 IL3P08700 152 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 SBK3P0C264 359 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 DANCRP0C864 163 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 CHN1P15882 459 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 KRT6CP48668 564 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 CTBP2P56545 445 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 PRR5P85299 388 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 CLCQ05315 142 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 DECR1Q16698 335 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 SPIN4Q56A73 249 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 C4orf48Q5BLP8 95 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 GTF2IRD2BQ6EKJ0 949 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 DNM1P46Q6ZS02 220 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 RPS27LQ71UM5 84 aaKnown RBP8.81□□□□□ -1
TRAFD1-207ENST00000550051 MARCH3Q86UD3 253 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 GTF2IRD2Q86UP8 949 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 FAM9CQ8IZT9 166 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 AKAP1Q92667 903 aaKnown RBP eCLIP8.81□□□□□ -1
TRAFD1-207ENST00000550051 FUT8Q9BYC5 575 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 ACTR6Q9GZN1 396 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 MRPL46Q9H2W6 279 aaKnown RBP8.81□□□□□ -1
TRAFD1-207ENST00000550051 ACSS3Q9H6R3 686 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 GIMAP4Q9NUV9 329 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 FLRT3Q9NZU0 649 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 XPR1Q9UBH6 696 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 DMGDHQ9UI17 866 aaKnown RBP8.81□□□□□ -1
TRAFD1-207ENST00000550051 GRID1Q9ULK0 1009 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 LAMP3Q9UQV4 416 aa8.81□□□□□ -1
TRAFD1-207ENST00000550051 SONP18583 2426 aaKnown RBP8.81□□□□□ -1
TRAFD1-207ENST00000550051 A0A087WZY1 265 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 GNG14A0A1W2PPG7 69 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 C7orf72A4D263 438 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 TTC36A6NLP5 189 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 RNF212BA8MTL3 300 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 UPK1AO00322 258 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 CD5LO43866 347 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 PLGP00747 810 aaPredicted RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 IFI6P09912 130 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 ZNF17P17021 662 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 TSPAN8P19075 237 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 DDCP20711 480 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 PHBP35232 272 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 EIF1AXP47813 144 aaKnown RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 PSMD4P55036 377 aaKnown RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 RAC1P63000 192 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 RASA2Q15283 850 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 UAP1Q16222 522 aaPredicted RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 CTU2Q2VPK5 515 aaKnown RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 APOOLQ6UXV4 268 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 STK32CQ86UX6 486 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 WFDC8Q8IUA0 241 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 RELL1Q8IUW5 271 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 WDR75Q8IWA0 830 aaKnown RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 PHC2Q8IXK0 858 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 OR2L13Q8N349 312 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 CDYL2Q8N8U2 506 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 ZNF511Q8NB15 262 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 STEAP2Q8NFT2 490 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 OR10D3Q8NH80 312 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.8□□□□□ -1
TRAFD1-207ENST00000550051 ACTRT2Q8TDY3 377 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 TMEM158Q8WZ71 300 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 HOXB13Q92826 284 aaPredicted RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 ELP4Q96EB1 424 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 APIPQ96GX9 242 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 ADGRG7Q96K78 797 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 BBS4Q96RK4 519 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 HBEGFQ99075 208 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 LMF2Q9BU23 707 aaKnown RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 ACPTQ9BZG2 426 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 GRIP2Q9C0E4 1043 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 Q9N2J8 555 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 ZDHHC18Q9NUE0 388 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 MCTS1Q9ULC4 181 aaKnown RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 WBP11Q9Y2W2 641 aaKnown RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 YLPM1P49750 1951 aaKnown RBP8.8□□□□□ -1
TRAFD1-207ENST00000550051 STAB1Q9NY15 2570 aa8.8□□□□□ -1
TRAFD1-207ENST00000550051 A8MT66 165 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 EIF1AYO14602 144 aaKnown RBP8.79□□□□□ -1
TRAFD1-207ENST00000550051 UTS2O95399 124 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 ANGPTL1O95841 491 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 TP53P04637 393 aaPredicted RBP8.79□□□□□ -1
TRAFD1-207ENST00000550051 JUNP05412 331 aaKnown RBP8.79□□□□□ -1
TRAFD1-207ENST00000550051 ANXA4P09525 319 aaPredicted RBP8.79□□□□□ -1
TRAFD1-207ENST00000550051 NID1P14543 1247 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 PSMA4P25789 261 aaKnown RBP8.79□□□□□ -1
TRAFD1-207ENST00000550051 ADH6P28332 368 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 TIA1P31483 386 aaKnown RBP eCLIP8.79□□□□□ -1
TRAFD1-207ENST00000550051 MAP3K8P41279 467 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 SERPINB9P50453 376 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 ACSM2AQ08AH3 577 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 C2orf54Q08AI8 447 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 C2orf80Q0P641 193 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 STX5Q13190 355 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 VEZF1Q14119 521 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 ZNHIT3Q15649 155 aaPredicted RBP8.79□□□□□ -1
TRAFD1-207ENST00000550051 PRSS53Q2L4Q9 553 aa8.79□□□□□ -1
TRAFD1-207ENST00000550051 UNC50Q53HI1 259 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms