RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CKAP4Q07065 602 aaKnown RBP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 LCP2Q13094 533 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 GRAMD1BQ3KR37 738 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 GLYR1Q49A26 553 aaPredicted RBP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 BEX5Q5H9J7 111 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 ZNF704Q6ZNC4 412 aaPredicted RBP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 OR2L13Q8N349 312 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 OR6K3Q8NGY3 331 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 TMEM171Q8WVE6 324 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 GFM2Q969S9 779 aaKnown RBP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 ELP4Q96EB1 424 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 AMDHD1Q96NU7 426 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 FMO2Q99518 471 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 NPAS1Q99742 590 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 PRRG4Q9BZD6 226 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 TBL1XR1Q9BZK7 514 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 MIEF1Q9NQG6 463 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 PLSCR4Q9NRQ2 329 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 SIRT5Q9NXA8 310 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 VDAC3Q9Y277 283 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 EMC9Q9Y3B6 208 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 CHD3Q12873 2000 aaKnown RBP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 A0A087WUV0 522 aaPredicted RBP13.8□□□□□ -0.2
RAB5C-205ENST00000550013 UQCRHLA0A096LP55 91 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 IGLV3-32A0A0A0MS00 114 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 SLITRK5O94991 958 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 NID1P14543 1247 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 GCAP28676 217 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 ECHS1P30084 290 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 NTSP30990 170 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 GABRA3P34903 492 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 GSTM5P46439 218 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 PRKAA2P54646 552 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 NR1H2P55055 460 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 CTBP2P56545 445 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 OCRLQ01968 901 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 C17orf67Q0P5P2 114 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 ZNHIT3Q15649 155 aaPredicted RBP13.8□□□□□ -0.2
RAB5C-205ENST00000550013 SH2D5Q6ZV89 423 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 GALNT10Q86SR1 603 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 PIK3R3Q92569 461 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 SLC9A6Q92581 669 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 L3HYPDHQ96EM0 354 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 PLPPR2Q96GM1 343 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 LMF2Q9BU23 707 aaKnown RBP13.8□□□□□ -0.2
RAB5C-205ENST00000550013 GSTO2Q9H4Y5 243 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 MYNNQ9NPC7 610 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 ZNF701Q9NV72 531 aaPredicted RBP13.8□□□□□ -0.2
RAB5C-205ENST00000550013 TAS2R7Q9NYW3 318 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 MRTO4Q9UKD2 239 aaKnown RBP13.8□□□□□ -0.2
RAB5C-205ENST00000550013 GRID1Q9ULK0 1009 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 STK38LQ9Y2H1 464 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 POLR3HQ9Y535 204 aaPredicted RBP13.8□□□□□ -0.2
RAB5C-205ENST00000550013 MXRA5Q9NR99 2828 aa13.8□□□□□ -0.2
RAB5C-205ENST00000550013 STAB1Q9NY15 2570 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 EXOC1LA0A1B0GW35 172 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 SERTM1A2A2V5 107 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 UBFD1O14562 309 aaKnown RBP13.79□□□□□ -0.2
RAB5C-205ENST00000550013 SS18L1O75177 396 aaPredicted RBP13.79□□□□□ -0.2
RAB5C-205ENST00000550013 PLGP00747 810 aaPredicted RBP13.79□□□□□ -0.2
RAB5C-205ENST00000550013 PAX1P15863 534 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 PPP3CBP16298 524 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 PRR5P85299 388 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 CAPRIN1Q14444 709 aaKnown RBP13.79□□□□□ -0.2
RAB5C-205ENST00000550013 CTU2Q2VPK5 515 aaKnown RBP13.79□□□□□ -0.2
RAB5C-205ENST00000550013 TIFABQ6ZNK6 161 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 ZNF551Q7Z340 670 aaPredicted RBP13.79□□□□□ -0.2
RAB5C-205ENST00000550013 EXOC3L1Q86VI1 746 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 WFDC8Q8IUA0 241 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 NOA1Q8NC60 698 aaKnown RBP13.79□□□□□ -0.2
RAB5C-205ENST00000550013 OR10D3Q8NH80 312 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 GMPPAQ96IJ6 420 aaPredicted RBP13.79□□□□□ -0.2
RAB5C-205ENST00000550013 ADGRG7Q96K78 797 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 TSPYL1Q9H0U9 437 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 MID1IP1Q9NPA3 183 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 EQTNQ9NQ60 294 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAB5C-205ENST00000550013 FREM1Q5H8C1 2179 aa13.79□□□□□ -0.2
RAB5C-205ENST00000550013 CCDC151A5D8V7 595 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 GOLGA8RI6L899 631 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 HS3ST1O14792 307 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 CXCL13O43927 109 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 ZNF17P17021 662 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 PSMD4P55036 377 aaKnown RBP13.78□□□□□ -0.2
RAB5C-205ENST00000550013 ATP5J2P56134 94 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 KRTAP1-1Q07627 177 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 ZNF844Q08AG5 666 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 HSPB3Q12988 150 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 TNK1Q13470 666 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 IMPG1Q17R60 797 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 CXXC5Q7LFL8 322 aaKnown RBP13.78□□□□□ -0.2
RAB5C-205ENST00000550013 SLC22A9Q8IVM8 553 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 CCNYL1Q8N7R7 359 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 GATSQ8NAP1 163 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 ANP32BQ92688 251 aaKnown RBP13.78□□□□□ -0.2
RAB5C-205ENST00000550013 KLHDC3Q9BQ90 382 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 TMEM204Q9BSN7 226 aa13.78□□□□□ -0.2
RAB5C-205ENST00000550013 ACTR6Q9GZN1 396 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms