RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MSX1P28360 303 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 RFX3P48380 749 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 ATP12AP54707 1039 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 KLF10Q13118 480 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 MAPRE2Q15555 327 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 ZNF141Q15928 474 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 KLHL26Q53HC5 615 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 CCNJQ5T5M9 372 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 TNFAIP8L2Q6P589 184 aaPredicted RBP13.2□□□□□ -0.3
DDX54-203ENST00000546869 APOOLQ6UXV4 268 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 DLEU7Q6UYE1 221 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 MTERF4Q7Z6M4 381 aaKnown RBP13.2□□□□□ -0.3
DDX54-203ENST00000546869 PIGWQ7Z7B1 504 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 ZAR1Q86SH2 424 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 MSRB3Q8IXL7 192 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 FADS6Q8N9I5 356 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 ZNF527Q8NB42 609 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 JSRP1Q96MG2 331 aaPredicted RBP13.2□□□□□ -0.3
DDX54-203ENST00000546869 ELAC2Q9BQ52 826 aaKnown RBP13.2□□□□□ -0.3
DDX54-203ENST00000546869 TBL1XR1Q9BZK7 514 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 DEFB127Q9H1M4 99 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 SLC25A37Q9NYZ2 338 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 FLRT3Q9NZU0 649 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 SLAMF8Q9P0V8 285 aa13.2□□□□□ -0.3
DDX54-203ENST00000546869 PRRC2CQ9Y520 2896 aaKnown RBP13.2□□□□□ -0.3
DDX54-203ENST00000546869 BBIP1A8MTZ0 92 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 SCDO00767 359 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 AQP7O14520 342 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 GNB5O14775 395 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 FCMRO60667 390 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 C1QCP02747 245 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 HPGDP15428 266 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 GPX2P18283 190 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 ADH7P40394 386 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 KCNC4Q03721 635 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 MRPL49Q13405 166 aaKnown RBP13.19□□□□□ -0.3
DDX54-203ENST00000546869 RGNQ15493 299 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 GTDC1Q4AE62 458 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 FLYWCH1Q4VC44 716 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 NHSL2Q5HYW2 709 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 COX20Q5RI15 118 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 LRRC74BQ6ZQY2 392 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 TRILQ7L0X0 811 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 C16orf62Q7Z3J2 963 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 MARCH3Q86UD3 253 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 SPPL2CQ8IUH8 684 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 DUSP19Q8WTR2 217 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 RAB8BQ92930 207 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 ROPN1LQ96C74 230 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 RTN4RQ9BZR6 473 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 TSPAN10Q9H1Z9 355 aaPredicted RBP13.19□□□□□ -0.3
DDX54-203ENST00000546869 PPP4R1LQ9P1A2 415 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 CORO2BQ9UQ03 480 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 DTNAQ9Y4J8 743 aa13.19□□□□□ -0.3
DDX54-203ENST00000546869 A0A1B0GTH9 108 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 PRAMEF27A3QJZ7 478 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 CLEC18AA5D8T8 446 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 C2orf72A6NCS6 295 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 NDUFB5O43674 189 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 CELA3AP09093 270 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 TFPTP0C1Z6 253 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 GDF1P27539 372 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 SRD5A2P31213 254 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 DCTP40126 519 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 UQCRFS1P47985 274 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 CASP9P55211 416 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 DSCR4P56555 118 aaPredicted RBP13.18□□□□□ -0.3
DDX54-203ENST00000546869 FUT5Q11128 374 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 STX5Q13190 355 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 UBAP2LQ14157 1087 aaKnown RBP13.18□□□□□ -0.3
DDX54-203ENST00000546869 GNA13Q14344 377 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 GANABQ14697 944 aaKnown RBP13.18□□□□□ -0.3
DDX54-203ENST00000546869 EIF2S3LQ2VIR3 472 aaKnown RBP13.18□□□□□ -0.3
DDX54-203ENST00000546869 GLYR1Q49A26 553 aaPredicted RBP13.18□□□□□ -0.3
DDX54-203ENST00000546869 RUNDC3AQ59EK9 446 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.18□□□□□ -0.3
DDX54-203ENST00000546869 TYW3Q6IPR3 259 aaKnown RBP13.18□□□□□ -0.3
DDX54-203ENST00000546869 CLEC18BQ6UXF7 455 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 DNAJC14Q6Y2X3 702 aaPredicted RBP13.18□□□□□ -0.3
DDX54-203ENST00000546869 FGD2Q7Z6J4 655 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 GALNT10Q86SR1 603 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 RETREG3Q86VR2 466 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 METTL25Q8N6Q8 603 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 CLEC18CQ8NCF0 446 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 RP9Q8TA86 221 aaKnown RBP13.18□□□□□ -0.3
DDX54-203ENST00000546869 NEIL3Q8TAT5 605 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 RELTQ969Z4 430 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 OR2B2Q9GZK3 357 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 MYLK2Q9H1R3 596 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 PTGES2Q9H7Z7 377 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 MTHFD2LQ9H903 347 aaPredicted RBP13.18□□□□□ -0.3
DDX54-203ENST00000546869 CALML5Q9NZT1 146 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 VAPAQ9P0L0 249 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 CAPN7Q9Y6W3 813 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 POLEQ07864 2286 aa13.18□□□□□ -0.3
DDX54-203ENST00000546869 TRGV5A0A0B4J1U4 118 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 B4DXG7 233 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 H3BNH8 94 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 FBP2O00757 339 aa13.17□□□□□ -0.3
DDX54-203ENST00000546869 BCKDKO14874 412 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms