RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 UBXN1Q04323 297 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 KCTD19Q17RG1 926 aaPredicted RBP2.33□□□□□ -2.04
CCDC38-204ENST00000546816 ETFRF1Q6IPR1 90 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 P4HA3Q7Z4N8 544 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 ZNF589Q86UQ0 364 aaPredicted RBP2.33□□□□□ -2.04
CCDC38-204ENST00000546816 CNTN4Q8IWV2 1026 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 ZNF786Q8N393 782 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 ZBTB44Q8NCP5 570 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 TMEM185AQ8NFB2 350 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 WDR36Q8NI36 951 aaKnown RBP2.33□□□□□ -2.04
CCDC38-204ENST00000546816 ARNTL2Q8WYA1 636 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 PHYHIPQ92561 330 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 MCHR2Q969V1 340 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 FGGYQ96C11 551 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 HAVCR1Q96D42 359 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 TMEM80Q96HE8 168 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 COQ7Q99807 217 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 FEM1AQ9BSK4 669 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 RPAP3Q9H6T3 665 aaPredicted RBP2.33□□□□□ -2.04
CCDC38-204ENST00000546816 RBM28Q9NW13 759 aaKnown RBP2.33□□□□□ -2.04
CCDC38-204ENST00000546816 DUS2Q9NX74 493 aaKnown RBP2.33□□□□□ -2.04
CCDC38-204ENST00000546816 KCNN3Q9UGI6 736 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 APPL1Q9UKG1 709 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 NOL7Q9UMY1 257 aaKnown RBP2.33□□□□□ -2.04
CCDC38-204ENST00000546816 L3MBTL1Q9Y468 752 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 METP08581 1390 aa2.33□□□□□ -2.04
CCDC38-204ENST00000546816 HIVEP2P31629 2446 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 IGKV2D-24A0A075B6R9 120 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 SLC9B1P1A6NJY1 282 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 DHRS7CA6NNS2 312 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 ERVV-1B6SEH8 477 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 ANKRD63C9JTQ0 380 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 ABCD4O14678 606 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 ALOX15BO15296 676 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 CHRNA1P02708 482 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 PGK2P07205 417 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 IGFBP1P08833 259 aaPredicted RBP2.32□□□□□ -2.04
CCDC38-204ENST00000546816 ZNF44P15621 663 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 H2AFXP16104 143 aaPredicted RBP2.32□□□□□ -2.04
CCDC38-204ENST00000546816 PTPN6P29350 595 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 CDH5P33151 784 aaPredicted RBP2.32□□□□□ -2.04
CCDC38-204ENST00000546816 RND3P61587 244 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 MRPS6P82932 125 aaKnown RBP2.32□□□□□ -2.04
CCDC38-204ENST00000546816 BTG3Q14201 252 aaPredicted RBP2.32□□□□□ -2.04
CCDC38-204ENST00000546816 CARTPTQ16568 116 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 AGKQ53H12 422 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 BEND6Q5SZJ8 279 aaPredicted RBP2.32□□□□□ -2.04
CCDC38-204ENST00000546816 CYB5R2Q6BCY4 276 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 SULT1C3Q6IMI6 304 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 HACD2Q6Y1H2 254 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 CCDC36Q8IYA8 594 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 BATF2Q8N1L9 274 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 ARIH2OSQ8N7S6 290 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 SPC24Q8NBT2 197 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 NEK11Q8NG66 645 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 EXOC6Q8TAG9 804 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 NEIL2Q969S2 332 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 SNX21Q969T3 373 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 ATG10Q9H0Y0 220 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 NXF3Q9H4D5 531 aaKnown RBP2.32□□□□□ -2.04
CCDC38-204ENST00000546816 GHRLQ9UBU3 117 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 SAMD4AQ9UPU9 718 aaKnown RBP2.32□□□□□ -2.04
CCDC38-204ENST00000546816 TEX264Q9Y6I9 313 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 ASTN1O14525 1302 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 RLFQ13129 1914 aa2.32□□□□□ -2.04
CCDC38-204ENST00000546816 TBL1XO60907 577 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 BBOX1O75936 387 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 SUPT7LO94864 414 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 OLFM2O95897 454 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 CD55P08174 381 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 RFC2P35250 354 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 RPL4P36578 427 aaKnown RBP2.31□□□□□ -2.04
CCDC38-204ENST00000546816 RPS10P46783 165 aaKnown RBP2.31□□□□□ -2.04
CCDC38-204ENST00000546816 SRP54P61011 504 aaKnown RBP2.31□□□□□ -2.04
CCDC38-204ENST00000546816 MYBPC1Q00872 1141 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 SRYQ05066 204 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 SNX1Q13596 522 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 DPYSQ14117 519 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 KCNJ11Q14654 390 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 SHHQ15465 462 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 TEX44Q53QW1 395 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 ZNF562Q6V9R5 426 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 STAC2Q6ZMT1 411 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 MIER3Q7Z3K6 550 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 IFNEQ86WN2 208 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 SFRP1Q8N474 314 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 ZNF540Q8NDQ6 660 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 C7orf33Q8WU49 177 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 ANKRD49Q8WVL7 239 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 IL1F10Q8WWZ1 152 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 SLC25A36Q96CQ1 311 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 CABS1Q96KC9 395 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 NRTNQ99748 197 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 POLD4Q9HCU8 107 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 MARCH5Q9NX47 278 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 CACNG2Q9Y698 323 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 WSB1Q9Y6I7 421 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 SLCO1B1Q9Y6L6 691 aa2.31□□□□□ -2.04
CCDC38-204ENST00000546816 IGKV2-28A0A075B6P5 120 aa2.3□□□□□ -2.04
CCDC38-204ENST00000546816 IGHV7-81A0A0B4J1V7 117 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms