RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PRIM2P49643 509 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 TMED10P49755 219 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 KHKP50053 298 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 SSR4P51571 173 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 NR0B1P51843 470 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 PRKAG1P54619 331 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 NRG3P56975 720 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 MLF1P58340 268 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 DCAF7P61962 342 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 PSPHP78330 225 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ARG2P78540 354 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 PLCXD2Q0VAA5 305 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ZNHIT3Q15649 155 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 TRMT5Q32P41 509 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 GTDC1Q4AE62 458 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 FBLN7Q53RD9 439 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 COQ5Q5HYK3 327 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 PAGE3Q5JUK9 113 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 LRIF1Q5T3J3 769 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 SAXO2Q658L1 398 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 REP15Q6BDI9 236 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 LCNL1Q6ZST4 164 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 WDR53Q7Z5U6 358 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 DHDDSQ86SQ9 333 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 RPS19BP1Q86WX3 136 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 TAGAPQ8N103 731 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 CYP4Z2PQ8N1L4 340 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 CLEC4FQ8N1N0 589 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 TMEM156Q8N614 296 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 CDRT4Q8N9R6 151 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 BCAS4Q8TDM0 211 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 TSPEARQ8WU66 669 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ASB15Q8WXK1 588 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 HOXB13Q92826 284 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ADIPOR1Q96A54 375 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 SPACA9Q96E40 222 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 NEURL3Q96EH8 262 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 OTUB1Q96FW1 271 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 AURKBQ96GD4 344 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 LCORQ96JN0 433 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF354BQ96LW1 612 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 LRRC37BQ96QE4 947 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 LMF1Q96S06 567 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 LMF2Q9BU23 707 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 NXF5Q9H1B4 397 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 MYLK2Q9H1R3 596 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 SERHL2Q9H4I8 314 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 CDCP1Q9H5V8 836 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 LIN28AQ9H9Z2 209 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ZBTB20Q9HC78 741 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 Q9N2J8 555 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 SLC6A13Q9NSD5 602 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 HPF1Q9NWY4 346 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 FAF1Q9UNN5 650 aaPredicted RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ERVK-11Q9UQG0 969 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 YARS2Q9Y2Z4 477 aaKnown RBP5.83□□□□□ -1.48
PRKDC-211ENST00000546304 NDUFAF1Q9Y375 327 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 OR10H1Q9Y4A9 318 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF407Q9C0G0 2248 aa5.83□□□□□ -1.48
PRKDC-211ENST00000546304 TRBV5-3A0A0A0MS03 114 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 OR5H15A6NDH6 313 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 TTC36A6NLP5 189 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CAPN14A8MX76 684 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 K7EM74 188 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 FXYD1O00168 92 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 FBP2O00757 339 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 MRASO14807 208 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 TO15178 435 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ZNF354AO60765 605 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 SLC25A12O75746 678 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 OR6B1O95007 311 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 NKX2-2O95096 273 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 KCNH1O95259 989 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 WDPCPO95876 746 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 F10P00742 488 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ALOX5P09917 674 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CT45A8P0DMV1 189 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CT45A9P0DMV2 189 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ACP2P11117 423 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 NAT2P11245 290 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 DRD5P21918 477 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ABCD3P28288 659 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 MAP3K8P41279 467 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 PPICP45877 212 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CYB561P49447 251 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 PSG6Q00889 435 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 OC90Q02509 493 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 TUBA3CQ13748 450 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 NFYCQ13952 458 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CYLC2Q14093 348 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 DUSP5Q16690 384 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 MMEL1Q495T6 779 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CT45A2Q5DJT8 189 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 PIGGQ5H8A4 983 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 FAM91A1Q658Y4 838 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 CDC73Q6P1J9 531 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 TNFAIP8L2Q6P589 184 aaPredicted RBP5.82□□□□□ -1.48
PRKDC-211ENST00000546304 ZCCHC12Q6PEW1 402 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 TUBA3EQ6PEY2 450 aa5.82□□□□□ -1.48
PRKDC-211ENST00000546304 OPN5Q6U736 354 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms