RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 TRBV23OR9-2A0A075B6M9 112 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 IRGMA1A4Y4 181 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 GSAPA4D1B5 854 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 ISM1B1AKI9 464 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 FAM25AB3EWG3 89 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 FAM25CB3EWG5 89 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 FAM25GB3EWG6 89 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 SYT5O00445 386 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 CPNE3O75131 537 aaKnown RBP14.75□□□□□ -0.05
LDLR-204ENST00000545707 HLA-DPB1P04440 258 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 YES1P07947 543 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 GKN3PP0CG01 181 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 TBXA2RP21731 343 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 ALAS2P22557 587 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 GCGRP47871 477 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 FRRS1Q6ZNA5 592 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 ZNF620Q6ZNG0 422 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 RAB7BQ96AH8 199 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 HCAR1Q9BXC0 346 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 DPH1Q9BZG8 443 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 C11orf49Q9H6J7 331 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 TRIM45Q9H8W5 580 aaPredicted RBP14.75□□□□□ -0.05
LDLR-204ENST00000545707 H2AFY2Q9P0M6 372 aaPredicted RBP14.75□□□□□ -0.05
LDLR-204ENST00000545707 TNFRSF10DQ9UBN6 386 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 ZNF780BQ9Y6R6 833 aa14.75□□□□□ -0.05
LDLR-204ENST00000545707 LYRM1O43325 122 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 HYAL3O43820 417 aaPredicted RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 AKAP8O43823 692 aaKnown RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 ZGLP1P0C6A0 271 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 TRAPPC2P0DI81 140 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 TRAPPC2BP0DI82 140 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 MYOGP15173 224 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 ELK1P19419 428 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 FPR3P25089 353 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 STAT5AP42229 794 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 ID2Q02363 134 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 CSTF1Q05048 431 aaKnown RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 EFR3AQ14156 821 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 PUS10Q3MIT2 529 aaKnown RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 IDNKQ5T6J7 187 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 FCRLBQ6BAA4 426 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 ZNF322Q6U7Q0 402 aaPredicted RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 OR4E2Q8NGC2 313 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 KIAA1143Q96AT1 154 aaPredicted RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 CHFRQ96EP1 664 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 ASB16Q96NS5 453 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 SMAD5Q99717 465 aaKnown RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 ACTRT3Q9BYD9 372 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 TMEM74BQ9NUR3 256 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 RBFOX1Q9NWB1 397 aaKnown RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 KLHL28Q9NXS3 571 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 PTGFRNQ9P2B2 879 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 MAU2Q9Y6X3 613 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 VCANP13611 3396 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 NPIPA5A0A0B4J1W7 369 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 A0A0G2JMP0 313 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 A0A0X1KG70 313 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 C12orf71A8MTZ7 269 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 NPIPA7E9PJI5 369 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 PRICKLE3O43900 615 aaPredicted RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 CEACAM5P06731 702 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 NPIPA8P0DM63 369 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 CHRNB1P11230 501 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 MLLT3P42568 568 aaPredicted RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 SNRPD2P62316 118 aaKnown RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 GPR68Q15743 365 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 CST6Q15828 149 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 DECR1Q16698 335 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 TJAP1Q5JTD0 557 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 ZNF57Q68EA5 555 aaPredicted RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 PSRC1Q6PGN9 363 aaPredicted RBP14.74□□□□□ -0.05
LDLR-204ENST00000545707 TMEM99Q8N816 258 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 OR4M2Q8NGB6 313 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 TMEM43Q9BTV4 400 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 CRISPLD2Q9H0B8 497 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 BTBD1Q9H0C5 482 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 UBQLN3Q9H347 655 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 IL23AQ9NPF7 189 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 ATP13A2Q9NQ11 1180 aa14.74□□□□□ -0.05
LDLR-204ENST00000545707 LANCL1O43813 399 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 REM1O75628 298 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 EML2O95834 649 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 CPN2P22792 545 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 HTR1FP30939 366 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 IFNA8P32881 189 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 ERVK-21P61565 698 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 ASB18Q6ZVZ8 466 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 MBOAT2Q6ZWT7 520 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 CXXC5Q7LFL8 322 aaKnown RBP14.73□□□□□ -0.05
LDLR-204ENST00000545707 ADGRD2Q7Z7M1 963 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 TMEFF1Q8IYR6 380 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 OR2T33Q8NG76 320 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 PFN4Q8NHR9 129 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 DNAJA4Q8WW22 397 aaPredicted RBP14.73□□□□□ -0.05
LDLR-204ENST00000545707 FGF13Q92913 245 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 SLC6A17Q9H1V8 727 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 GALNT9Q9HCQ5 603 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 C20orf141Q9NUB4 165 aa14.73□□□□□ -0.05
LDLR-204ENST00000545707 ZNF443Q9Y2A4 671 aaPredicted RBP14.73□□□□□ -0.05
LDLR-204ENST00000545707 EXOGQ9Y2C4 368 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms