RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 CAVIN3Q969G5 261 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 METTL2AQ96IZ6 378 aaKnown RBP12.7□□□□□ -0.38
DDX11-228ENST00000545115 CCL19Q99731 98 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 UBTD1Q9HAC8 227 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 STOML1Q9UBI4 398 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 EMCNQ9ULC0 261 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 NIPBLQ6KC79 2804 aaeCLIP12.7□□□□□ -0.38
DDX11-228ENST00000545115 UQCRHLA0A096LP55 91 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 AQP8O94778 261 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 HEXAP06865 529 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 ZNF17P17021 662 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 GABRA3P34903 492 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 HSPB3Q12988 150 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 GRAMD1BQ3KR37 738 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 VPS26BQ4G0F5 336 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 CFAP157Q5JU67 520 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 C20orf204Q6ZNR8 217 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 ZNF550Q7Z398 422 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 GGNQ86UU5 652 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 IFT20Q8IY31 132 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 ZNF610Q8N9Z0 462 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 PIK3R3Q92569 461 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 ZC3HAV1LQ96H79 300 aaKnown RBP12.69□□□□□ -0.38
DDX11-228ENST00000545115 ZNF764Q96H86 408 aaPredicted RBP12.69□□□□□ -0.38
DDX11-228ENST00000545115 COX4I2Q96KJ9 171 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 EGLN2Q96KS0 407 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 MARK4Q96L34 752 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 HHATLQ9HCP6 504 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 EQTNQ9NQ60 294 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 VDAC3Q9Y277 283 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 EMC9Q9Y3B6 208 aa12.69□□□□□ -0.38
DDX11-228ENST00000545115 GXYLT2A0PJZ3 443 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 ALG1L2C9J202 215 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 EIF1AYO14602 144 aaKnown RBP12.68□□□□□ -0.38
DDX11-228ENST00000545115 PDPK1O15530 556 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 GMFGO60234 142 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 SEC22BO75396 215 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 IGKV1D-16P01601 117 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 PROCP04070 461 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 UROSP10746 265 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 PRPS2P11908 318 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 TBXA2RP21731 343 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 PRPH2P23942 346 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 GPC1P35052 558 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 EIF1AXP47813 144 aaKnown RBP12.68□□□□□ -0.38
DDX11-228ENST00000545115 DNAJB13P59910 316 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 KIAA0040Q15053 153 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 TMEM44Q2T9K0 475 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 CCDC153Q494R4 210 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 PPP4R4Q6NUP7 873 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 PRSS57Q6UWY2 283 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 APOOLQ6UXV4 268 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 ZNF551Q7Z340 670 aaPredicted RBP12.68□□□□□ -0.38
DDX11-228ENST00000545115 OR6K3Q8NGY3 331 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 GPR151Q8TDV0 419 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 HOXB13Q92826 284 aaPredicted RBP12.68□□□□□ -0.38
DDX11-228ENST00000545115 ARSGQ96EG1 525 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 GMPPAQ96IJ6 420 aaPredicted RBP12.68□□□□□ -0.38
DDX11-228ENST00000545115 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 PRRG4Q9BZD6 226 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 KLHL4Q9C0H6 718 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 IQCGQ9H095 443 aaKnown RBP12.68□□□□□ -0.38
DDX11-228ENST00000545115 TNFRSF12AQ9NP84 129 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 PAQR5Q9NXK6 330 aaPredicted RBP12.68□□□□□ -0.38
DDX11-228ENST00000545115 CCL27Q9Y4X3 112 aa12.68□□□□□ -0.38
DDX11-228ENST00000545115 A0A087WZY1 265 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 A0A1W2PPM1 405 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 SHISA8B8ZZ34 492 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 NPIPB8E9PQR5 432 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 NDUFB5O43674 189 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 NKX2-2O95096 273 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 PLGP00747 810 aaPredicted RBP12.67□□□□□ -0.38
DDX11-228ENST00000545115 NGFRP08138 427 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 FAM153BP0C7A2 387 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 LOXP28300 417 aaPredicted RBP12.67□□□□□ -0.38
DDX11-228ENST00000545115 MAP3K8P41279 467 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 CCT5P48643 541 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 EXOC3L2Q2M3D2 409 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 FAM153CQ494X1 144 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 CLEC6AQ6EIG7 209 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 C22orf34Q6ZV56 151 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 SZRD1Q7Z422 152 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 YTHDF3Q7Z739 585 aaKnown RBP12.67□□□□□ -0.38
DDX11-228ENST00000545115 WDR75Q8IWA0 830 aaKnown RBP12.67□□□□□ -0.38
DDX11-228ENST00000545115 CDRT4Q8N9R6 151 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 OR10D3Q8NH80 312 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 CEP70Q8NHQ1 597 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 ZFP28Q8NHY6 868 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 SLC9A6Q92581 669 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 ZBED6CLQ96FA7 236 aaPredicted RBP12.67□□□□□ -0.38
DDX11-228ENST00000545115 PERPQ96FX8 193 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 Q96MF0 132 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 CCT7Q99832 543 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 BDH2Q9BUT1 245 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 TXLNGYQ9BZA5 131 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 LRTM1Q9HBL6 345 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 PLSCR4Q9NRQ2 329 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 C1orf109Q9NX04 203 aa12.67□□□□□ -0.38
DDX11-228ENST00000545115 MCTS1Q9ULC4 181 aaKnown RBP12.67□□□□□ -0.38
DDX11-228ENST00000545115 ARID1AO14497 2285 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms