RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TTMPQ5BVD1 217 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 GALNT10Q86SR1 603 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 CCDC71Q8IV32 467 aaPredicted RBP14.29□□□□□ -0.12
CCDC78-216ENST00000544996 CLECL1Q8IZS7 167 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 FADS6Q8N9I5 356 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 OR2M3Q8NG83 312 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 OR4A15Q8NGL6 344 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 OR5AK3PQ8NH89 298 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 LILRB4Q8NHJ6 448 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 CDS1Q92903 461 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 OTUB1Q96FW1 271 aaPredicted RBP14.29□□□□□ -0.12
CCDC78-216ENST00000544996 WDYHV1Q96HA8 205 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 SFXN2Q96NB2 322 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 ZBTB18Q99592 522 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 SH3GL2Q99962 352 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 KCNJ16Q9NPI9 418 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 GPATCH2Q9NW75 528 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 MED11Q9P086 117 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 ZNF407Q9C0G0 2248 aa14.29□□□□□ -0.12
CCDC78-216ENST00000544996 RNF103-CHMP3A0A140T963 221 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 DUXAA6NLW8 204 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 CYSRT1A8MQ03 144 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 ALG1L2C9J202 215 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 SCDO00767 359 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 NDUFB5O43674 189 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 EPPINO95925 133 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 IDO1P14902 403 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 CHMP24386 653 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 GRNP28799 593 aaKnown RBP14.28□□□□□ -0.12
CCDC78-216ENST00000544996 ZFP36L2P47974 494 aaKnown RBP14.28□□□□□ -0.12
CCDC78-216ENST00000544996 NME5P56597 212 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 WNT3P56703 355 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 GANABQ14697 944 aaKnown RBP14.28□□□□□ -0.12
CCDC78-216ENST00000544996 FAM174BQ3ZCQ3 159 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 ACSF3Q4G176 576 aaPredicted RBP14.28□□□□□ -0.12
CCDC78-216ENST00000544996 SPANXN4Q5MJ08 99 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 CCNJQ5T5M9 372 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 RIPPLY2Q5TAB7 128 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 C6orf120Q7Z4R8 191 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 ANKRD46Q86W74 232 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 LACC1Q8IV20 430 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 EXPH5Q8NEV8 1989 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 OR4C3Q8NH37 302 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 ACTRT2Q8TDY3 377 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 MARVELD3Q96A59 401 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 C7orf26Q96N11 449 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 HOXD1Q9GZZ0 328 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 RPH3AQ9Y2J0 694 aaPredicted RBP14.28□□□□□ -0.12
CCDC78-216ENST00000544996 GPR45Q9Y5Y3 372 aa14.28□□□□□ -0.12
CCDC78-216ENST00000544996 A0A0G2JNJ9 132 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 HSPB2A8KAH6 182 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 H0Y3Z8 333 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 ZIC3O60481 467 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 DIAPH2O60879 1101 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 CPSF4O95639 269 aaKnown RBP14.27□□□□□ -0.13
CCDC78-216ENST00000544996 OXSR1O95747 527 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-216ENST00000544996 COX6B1P14854 86 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 CPN1P15169 458 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 HK1P19367 917 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 TCEA1P23193 301 aaKnown RBP14.27□□□□□ -0.13
CCDC78-216ENST00000544996 MSX1P28360 303 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 GFRA1P56159 465 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 UFM1P61960 85 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 LRRC74AQ0VAA2 488 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 HSPB2Q16082 182 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 DCST1Q5T197 706 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 DCST2Q5T1A1 773 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 RAET1LQ5VY80 246 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 APOOLQ6UXV4 268 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 MISPQ8IVT2 679 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 ZNF527Q8NB42 609 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 GLB1L3Q8NCI6 653 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-216ENST00000544996 ZPLD1Q8TCW7 415 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 MAELQ96JY0 434 aaKnown RBP14.27□□□□□ -0.13
CCDC78-216ENST00000544996 OR7D2Q96RA2 312 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 RTN4RQ9BZR6 473 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 INTS9Q9NV88 658 aaKnown RBP14.27□□□□□ -0.13
CCDC78-216ENST00000544996 FBXO34Q9NWN3 711 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 Q9UFV3 132 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 USH1CQ9Y6N9 552 aa14.27□□□□□ -0.13
CCDC78-216ENST00000544996 IGLV3-32A0A0A0MS00 114 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 CD8B2A6NJW9 211 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 FAM90A27PA6NNH2 459 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 C17orf51A8MQB3 221 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 LINC01387J3KSC0 135 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 SCN2BO60939 215 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 PGRP06401 933 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 MATN1P21941 496 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 UQCRC2P22695 453 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 ADH7P40394 386 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 PPP2R2AP63151 447 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 SRYQ05066 204 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 GSTA3Q16772 222 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 SLC9B1Q4ZJI4 515 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 NSUN5P2Q63ZY6 315 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 ZAR1Q86SH2 424 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 TRIML2Q8N7C3 387 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 GOT1L1Q8NHS2 421 aaPredicted RBP14.26□□□□□ -0.13
CCDC78-216ENST00000544996 C1GALT1C1Q96EU7 318 aa14.26□□□□□ -0.13
CCDC78-216ENST00000544996 SLC35G5Q96KT7 338 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms