RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TBC1D3IA0A087WXS9 549 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 TBC1D3EA0A087X179 549 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 OR52A4PA6NMU1 304 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 TBC1D3LB9A6J9 549 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 SGK494L7N484 410 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 PPM1DO15297 605 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 PLOD3O60568 738 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 TMEM127O75204 238 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 RGS9O75916 674 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-223ENST00000544669 TBC1D3HP0C7X1 549 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 LAMP2P13473 410 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 CPMP14384 443 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 IGFALSP35858 605 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 GCGRP47871 477 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 EVX1P49640 407 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 PDX1P52945 283 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ACTC1P68032 377 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ACTA1P68133 377 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 SHC2P98077 582 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 FABP5Q01469 135 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 FGL2Q14314 439 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 SF3A2Q15428 464 aaKnown RBP12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ATAD3CQ5T2N8 411 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 TBC1D3CQ6IPX1 549 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF613Q6PF04 617 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF322Q6U7Q0 402 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-223ENST00000544669 TMPRSS11FQ6ZWK6 438 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 TBC1D3Q8IZP1 549 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-223ENST00000544669 CAMKK1Q8N5S9 505 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ARIH2OSQ8N7S6 290 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 OR4E2Q8NGC2 313 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 RERGQ96A58 199 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-223ENST00000544669 UBL7Q96S82 380 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-223ENST00000544669 GABRG3Q99928 467 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF350Q9GZX5 532 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 TMEM27Q9HBJ8 222 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 RBFOX1Q9NWB1 397 aaKnown RBP12.16□□□□□ -0.46
CPSF7-223ENST00000544669 TOR4AQ9NXH8 423 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 DAPP1Q9UN19 280 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 CARD8Q9Y2G2 431 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 SLC22A7Q9Y694 548 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 FAM47E-STBD1D6RA91 191 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 GABRPO00591 440 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 SERPINA3P01011 423 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ATP1B1P05026 303 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 NID1P14543 1247 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 CELP19835 753 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 TRHRP34981 398 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-223ENST00000544669 MAP2K3P46734 347 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 EEF1A1P68104 462 aaKnown RBP12.16□□□□□ -0.46
CPSF7-223ENST00000544669 CLEC12AQ5QGZ9 265 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 SLC30A6Q6NXT4 461 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 LHFPL3Q86UP9 236 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 MARCH9Q86YJ5 346 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 Q8N402 240 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 LNX2Q8N448 690 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 MS4A15Q8N5U1 240 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ATP6V1C2Q8NEY4 427 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 WDR92Q96MX6 357 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 SDF2Q99470 211 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF559Q9BR84 538 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.16□□□□□ -0.468e-9■■□□□ 12.1
CPSF7-223ENST00000544669 MIR1-1HGQ9H1L0 117 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 UBQLN3Q9H347 655 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 SLA2Q9H6Q3 261 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 PPP1R3EQ9H7J1 279 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 FOLH1BQ9HBA9 442 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 CTPS2Q9NRF8 586 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 SPHK1Q9NYA1 384 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 KCMF1Q9P0J7 381 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 SLC7A7Q9UM01 511 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 GPR52Q9Y2T5 361 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 N6AMT1Q9Y5N5 214 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 KCNE3Q9Y6H6 103 aa12.16□□□□□ -0.46
CPSF7-223ENST00000544669 ORC5O43913 435 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 PRKRAO75569 313 aaKnown RBP12.15□□□□□ -0.46
CPSF7-223ENST00000544669 IFNGP01579 166 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 MT-ND5P03915 603 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 ZNF888P0CJ79 500 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-223ENST00000544669 RPS4Y1P22090 263 aaKnown RBP12.15□□□□□ -0.46
CPSF7-223ENST00000544669 ERP29P30040 261 aaKnown RBP12.15□□□□□ -0.46
CPSF7-223ENST00000544669 PEBP1P30086 187 aaKnown RBP12.15□□□□□ -0.46
CPSF7-223ENST00000544669 BMP8BP34820 402 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 RBM34P42696 430 aaKnown RBP12.15□□□□□ -0.46
CPSF7-223ENST00000544669 YPEL5P62699 121 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 SKP1P63208 163 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 NFATC4Q14934 902 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 VN1R4Q7Z5H5 301 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 WDR53Q7Z5U6 358 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-223ENST00000544669 BMP8AQ7Z5Y6 402 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 LRRC28Q86X40 367 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-223ENST00000544669 LIX1LQ8IVB5 337 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 NKAIN4Q8IVV8 208 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 SLC16A11Q8NCK7 471 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 OR7G2Q8NG99 324 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 OR4Q3Q8NH05 313 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 TMEM239Q8WW34 195 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 KAT2AQ92830 837 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 CDS1Q92903 461 aa12.15□□□□□ -0.46
CPSF7-223ENST00000544669 NDC1Q9BTX1 674 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms