RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	GLT8D2	Q9H1C3	349 aa		3.03	□□□□□ -1.92
RAP1B-231	ENST00000544639	SLC25A51	Q9H1U9	297 aa		3.03	□□□□□ -1.92
RAP1B-231	ENST00000544639	PNO1	Q9NRX1	252 aa	Known RBP	3.03	□□□□□ -1.92
RAP1B-231	ENST00000544639	ACTR3B	Q9P1U1	418 aa		3.03	□□□□□ -1.92
RAP1B-231	ENST00000544639	KLHL21	Q9UJP4	597 aa		3.03	□□□□□ -1.92
RAP1B-231	ENST00000544639	L3MBTL1	Q9Y468	752 aa		3.03	□□□□□ -1.92
RAP1B-231	ENST00000544639	GMPPB	Q9Y5P6	360 aa		3.03	□□□□□ -1.92
RAP1B-231	ENST00000544639	FLVCR1	Q9Y5Y0	555 aa		3.03	□□□□□ -1.92
RAP1B-231	ENST00000544639	EPOP	A6NHQ4	379 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	SAGE2P	A6NJ88	616 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639		E7ENQ6	273 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639		F8WDY8	70 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	CHAD	O15335	359 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	VPS26A	O75436	327 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	THRB	P10828	461 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	ANXA3	P12429	323 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	XRCC1	P18887	633 aa	Predicted RBP	3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	AXL	P30530	894 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	NF2	P35240	595 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	ADRA1A	P35348	466 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	RND3	P61587	244 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	LYZ	P61626	148 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	SBK1	Q52WX2	424 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	TEX44	Q53QW1	395 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	PAGE2B	Q5JRK9	111 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	FAM120AOS	Q5T036	256 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	ZNF658	Q5TYW1	1059 aa	Predicted RBP	3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	ERAS	Q7Z444	233 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	LHFPL4	Q7Z7J7	247 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	VASH2	Q86V25	355 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	CBWD2	Q8IUF1	395 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	SELENOM	Q8WWX9	145 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	MAPKAP1	Q9BPZ7	522 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	NFKBIZ	Q9BYH8	718 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	CCSER1	Q9C0I3	900 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	ZNF702P	Q9H963	129 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	POLD4	Q9HCU8	107 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	UTP6	Q9NYH9	597 aa	Known RBP	3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	TMEM9	Q9P0T7	183 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	RNF6	Q9Y252	685 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	CA5B	Q9Y2D0	317 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	AP4B1	Q9Y6B7	739 aa		3.02	□□□□□ -1.93
RAP1B-231	ENST00000544639	TRIM3	O75382	744 aa	Predicted RBP	3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	STX11	O75558	287 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	SERF1A	O75920	110 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	AKR7A3	O95154	331 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	TRIM16	O95361	564 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	PGK1	P00558	417 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	CD55	P08174	381 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	DUX4L4	P0CJ87	422 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	PAICS	P22234	425 aa	Known RBP	3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	ZBTB25	P24278	435 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	PTGFR	P43088	359 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	MTTP	P55157	894 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	BPIFB3	P59826	476 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	OSTN	P61366	133 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	RPL8	P62917	257 aa	Known RBP	3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	OVGP1	Q12889	678 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	ZNF154	Q13106	437 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	KCNJ11	Q14654	390 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	PRR4	Q16378	134 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	ISX	Q2M1V0	245 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	TMEM52B	Q4KMG9	183 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	PVRIG	Q6DKI7	326 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	ARSK	Q6UWY0	536 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	CATSPER4	Q7RTX7	472 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	CADM2	Q8N3J6	435 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	OR5AU1	Q8NGC0	362 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	OR9A4	Q8NGU2	314 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	ARNTL2	Q8WYA1	636 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	FAM122A	Q96E09	287 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	DHTKD1	Q96HY7	919 aa	Predicted RBP	3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	HPDL	Q96IR7	371 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	VPS35	Q96QK1	796 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	FICD	Q9BVA6	458 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	AGPAT5	Q9NUQ2	364 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	RBM28	Q9NW13	759 aa	Known RBP	3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	ANKMY1	Q9P2S6	941 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	CYTH4	Q9UIA0	394 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	B9D1	Q9UPM9	204 aa		3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.01	□□□□□ -1.93
RAP1B-231	ENST00000544639	IGKV6D-41	A0A0C4DH26	115 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	ZFP92	A6NM28	416 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639		E9PLD3	99 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639		K7ENP7	123 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	IGHV3-23	P01764	117 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	ZNF19	P17023	458 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	RGR	P47804	291 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	P2RY4	P51582	365 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	LIM2	P55344	173 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	RIPPLY3	P57055	190 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	RPL32	P62910	135 aa	Known RBP	3	□□□□□ -1.93
RAP1B-231	ENST00000544639	PDZK1IP1	Q13113	114 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	TRIP10	Q15642	601 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	INA	Q16352	499 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	LINC01620	Q4KN68	170 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	METTL11B	Q5VVY1	283 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	NIPAL3	Q6P499	406 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	CYS1	Q717R9	158 aa		3	□□□□□ -1.93
RAP1B-231	ENST00000544639	SERPINA9	Q86WD7	417 aa		3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms