RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 SDHDO14521 159 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 IMPA2O14732 288 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 CFLARO15519 480 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 IDH3BO43837 385 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 EDIL3O43854 480 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 RANBP6O60518 1105 aaKnown RBP3.06□□□□□ -1.92
SCFD1-207ENST00000544052 IGKV3-20P01619 116 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 IGHG3P01860 377 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 KRT6BP04259 564 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF10P21506 573 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-207ENST00000544052 RFC2P35250 354 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 PTGFRP43088 359 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 KRT6CP48668 564 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 FKBP3Q00688 224 aaKnown RBP3.06□□□□□ -1.92
SCFD1-207ENST00000544052 SRYQ05066 204 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 FASTKD3Q14CZ7 662 aaKnown RBP3.06□□□□□ -1.92
SCFD1-207ENST00000544052 HAGHQ16775 308 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 PARP6Q2NL67 630 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 ACSF3Q4G176 576 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-207ENST00000544052 RIPPLY2Q5TAB7 128 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 PAQR9Q6ZVX9 377 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 NUFIP2Q7Z417 695 aaKnown RBP3.06□□□□□ -1.92
SCFD1-207ENST00000544052 LUZP1Q86V48 1076 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF781Q8N8C0 355 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 Q8NBF4 154 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 VPS39Q96JC1 886 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 ANKRD27Q96NW4 1050 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 WRAP53Q9BUR4 548 aaKnown RBP3.06□□□□□ -1.92
SCFD1-207ENST00000544052 KAT8Q9H7Z6 458 aaKnown RBP3.06□□□□□ -1.92
SCFD1-207ENST00000544052 CALHM2Q9HA72 323 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 CENPMQ9NSP4 180 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 AATFQ9NY61 560 aaKnown RBP eCLIP3.06□□□□□ -1.92
SCFD1-207ENST00000544052 NUDT4Q9NZJ9 180 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 MROH5Q6ZUA9 1318 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 KIF16BQ96L93 1317 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 TRGV8A0A0C4DH27 118 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 CYB561D2O14569 222 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 BUB1O43683 1085 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 SDC3O75056 442 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 NDUFA7O95182 113 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 PCCBP05166 539 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 GSTA1P08263 222 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 EPB41P11171 864 aaKnown RBP3.05□□□□□ -1.92
SCFD1-207ENST00000544052 FOSL2P15408 326 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 UCP1P25874 307 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 DLSTP36957 453 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 HTR5AP47898 357 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 SLC1A6P48664 564 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 TDO2P48775 406 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 TMEM50BP56557 158 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 HERVK_113P63132 956 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 ERVK-8P63133 956 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 EXOSC2Q13868 293 aaKnown RBP3.05□□□□□ -1.92
SCFD1-207ENST00000544052 FASTKQ14296 549 aaKnown RBP3.05□□□□□ -1.92
SCFD1-207ENST00000544052 TRIP10Q15642 601 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 SHROOM1Q2M3G4 852 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-207ENST00000544052 GCNT2Q8N0V5 402 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 CENPSQ8N2Z9 138 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 SUMF1Q8NBK3 374 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 OR2T34Q8NGX1 318 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 THRSPQ92748 146 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 LHX4Q969G2 390 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 TRIM44Q96DX7 344 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-207ENST00000544052 CPXM1Q96SM3 734 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 LGMNQ99538 433 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 ERP44Q9BS26 406 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 FICDQ9BVA6 458 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 ERVK-6Q9BXR3 956 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 Q9HAA7 133 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 GPR83Q9NYM4 423 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 RDH8Q9NYR8 311 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 THYN1Q9P016 225 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 ATP6V1HQ9UI12 483 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 FZR1Q9UM11 496 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 LTBP2Q14767 1821 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 GAKO14976 1311 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 PLXNA1Q9UIW2 1896 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 IGHV4-30-2A0A087WSY4 118 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 CCL15-CCL14A0A0B4J2E2 113 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 A0A0J9YVX5 310 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 A0A1B0GWJ7 208 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 WASHC1A8K0Z3 465 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 WASH3PC4AMC7 463 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 LINC01565O15544 149 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 FRAT2O75474 233 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-207ENST00000544052 ANXA4P09525 319 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-207ENST00000544052 NF2P35240 595 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 CYLC1P35663 651 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-207ENST00000544052 ATP4BP51164 291 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 NOP14P78316 857 aaKnown RBP3.05□□□□□ -1.92
SCFD1-207ENST00000544052 NUCB2P80303 420 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 LY6DQ14210 128 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 CCL15Q16663 113 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 MUC21Q5SSG8 566 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 PNCKQ6P2M8 343 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 SLC39A4Q6P5W5 647 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 WASH2PQ6VEQ5 465 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 ADAMTSL5Q6ZMM2 481 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 LPCAT2Q7L5N7 544 aa3.05□□□□□ -1.92
SCFD1-207ENST00000544052 P4HA3Q7Z4N8 544 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms