RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TPT1P13693 172 aaKnown RBP14.62□□□□□ -0.07
CHD4-210ENST00000544040 DRD2P14416 443 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 HOXD13P35453 343 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 AFF3P51826 1226 aaKnown RBP14.62□□□□□ -0.07
CHD4-210ENST00000544040 NSDHLQ15738 373 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 OR52W1Q6IF63 320 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 C12orf45Q8N5I9 185 aaPredicted RBP14.62□□□□□ -0.07
CHD4-210ENST00000544040 SNAPC3Q92966 411 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 C1orf74Q96LT6 269 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 PRMT8Q9NR22 394 aaPredicted RBP14.62□□□□□ -0.07
CHD4-210ENST00000544040 SPHK2Q9NRA0 654 aa14.62□□□□□ -0.07
CHD4-210ENST00000544040 PEX14O75381 377 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 ZNF43P17038 809 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 JUNDP17535 347 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 PIP5KL1Q5T9C9 394 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 RELL1Q8IUW5 271 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 ZNF578Q96N58 590 aaPredicted RBP14.61□□□□□ -0.07
CHD4-210ENST00000544040 TRIB3Q96RU7 358 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 ZNF160Q9HCG1 818 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 BCL9LQ86UU0 1499 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 TRAPPC13A5PLN9 417 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 CD300LBA8K4G0 201 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 H3BUI4 141 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 SULT1C2O00338 296 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 PLSCR1O15162 318 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 ADARB1P78563 741 aaKnown RBP14.61□□□□□ -0.07
CHD4-210ENST00000544040 CYCSP99999 105 aaKnown RBP14.61□□□□□ -0.07
CHD4-210ENST00000544040 MS4A2Q01362 244 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 RAB31Q13636 194 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 FKRPQ9H9S5 495 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 CPNE5Q9HCH3 593 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 A0A1W2PQU0 124 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 HLA-DMAP28067 261 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 NDUFAF5Q5TEU4 345 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 C3P1Q6ZMU1 363 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 MFSD6LQ8IWD5 586 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 IL1F10Q8WWZ1 152 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 APEHP13798 732 aaKnown RBP14.61□□□□□ -0.07
CHD4-210ENST00000544040 RAB3AP20336 220 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 GIFP27352 417 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 PTGER1P34995 402 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 INCA1Q0VD86 236 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 GALNT1Q10472 559 aaPredicted RBP14.61□□□□□ -0.07
CHD4-210ENST00000544040 BTN1A1Q13410 526 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 C6orf132Q5T0Z8 1188 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 IL20RBQ6UXL0 311 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 B3GNT7Q8NFL0 401 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 OR9K2Q8NGE7 335 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 ZNF461Q8TAF7 563 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 CHFRQ96EP1 664 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 SNX18Q96RF0 628 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 VEGFDO43915 354 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 MAGEB1P43366 347 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 RELAQ04206 551 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 OR9A2Q8NGT5 310 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 FNDC9Q8TBE3 224 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 COPS3Q9UNS2 423 aa14.61□□□□□ -0.07
CHD4-210ENST00000544040 ARSBP15848 533 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 PAGE3Q5JUK9 113 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 PNPLA1Q8N8W4 532 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 ACTRT3Q9BYD9 372 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 RNF32Q9H0A6 362 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 SLC38A1Q9H2H9 487 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 TXNL4BQ9NX01 149 aaKnown RBP14.6□□□□□ -0.07
CHD4-210ENST00000544040 INTS6Q9UL03 887 aaKnown RBP14.6□□□□□ -0.07
CHD4-210ENST00000544040 IER3IP1Q9Y5U9 82 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 A0A0U1RQS6 177 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 RPS10-NUDT3A0A1W2PQS6 291 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 KLHL33A6NCF5 533 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 GLTPD2A6NH11 291 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 P04436 131 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 GYPBP06028 91 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 CSF1P09603 554 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 RPS10P46783 165 aaKnown RBP14.6□□□□□ -0.07
CHD4-210ENST00000544040 KCNK13Q9HB14 408 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 ENPP5Q9UJA9 477 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 SDC3O75056 442 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 HOXD12P35452 270 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 SF3A2Q15428 464 aaKnown RBP14.6□□□□□ -0.07
CHD4-210ENST00000544040 RAB6CQ53S08 254 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 KIAA0319Q5VV43 1072 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 FBXW12Q6X9E4 464 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 COMMD6Q7Z4G1 85 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 TP53INP2Q8IXH6 220 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 PCNPQ8WW12 178 aaKnown RBP14.6□□□□□ -0.07
CHD4-210ENST00000544040 RAB6CQ9H0N0 254 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 KLHL13Q9P2N7 655 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 CNOT11Q9UKZ1 510 aaKnown RBP14.6□□□□□ -0.07
CHD4-210ENST00000544040 TSPAN11A1L157 253 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 DUX1O43812 170 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 DBHP09172 617 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 RAB28P51157 221 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 SEC61A1P61619 476 aaKnown RBP14.6□□□□□ -0.07
CHD4-210ENST00000544040 IL13RA1P78552 427 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 GAB1Q13480 694 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 SMAD2Q15796 467 aaKnown RBP14.6□□□□□ -0.07
CHD4-210ENST00000544040 ZNF783Q6ZMS7 281 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 ZNF440Q8IYI8 595 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 SFXN5Q8TD22 340 aa14.6□□□□□ -0.07
CHD4-210ENST00000544040 OR5B2Q96R09 309 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms