RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 FRMD6Q96NE9 622 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 TRNT1Q96Q11 434 aaKnown RBP12.47□□□□□ -0.41
SP140-213ENST00000543928 TBL1XR1Q9BZK7 514 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 UBQLN4Q9NRR5 601 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 TAGLN3Q9UI15 199 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 METRNQ9UJH8 293 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 MKLN1Q9UL63 735 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 ABCG2Q9UNQ0 655 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 WDR45Q9Y484 360 aa12.47□□□□□ -0.41
SP140-213ENST00000543928 C2orf72A6NCS6 295 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 TMEM247A6NEH6 219 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 NPIPB9F8W1W9 429 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 SUV39H1O43463 412 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 TRIM3O75382 744 aaPredicted RBP12.46□□□□□ -0.41
SP140-213ENST00000543928 CBX6O95503 412 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 BCHEP06276 602 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 NGFRP08138 427 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 CHRM4P08173 479 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 GUSBP08236 651 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 HPGDP15428 266 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 TBXA2RP21731 343 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 SLC6A2P23975 617 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 DCTP40126 519 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 MASP1P48740 699 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 CLK3P49761 638 aaKnown RBP12.46□□□□□ -0.41
SP140-213ENST00000543928 ATP12AP54707 1039 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 GAS1P54826 345 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 MLLT10P55197 1068 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 PLGLB1Q02325 96 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 CHRNEQ04844 493 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 FOXO1Q12778 655 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 INPP5JQ15735 1006 aaPredicted RBP12.46□□□□□ -0.41
SP140-213ENST00000543928 MAPK11Q15759 364 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 CYP51A1Q16850 503 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 FAM180AQ6UWF9 173 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 APOOLQ6UXV4 268 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 HACD2Q6Y1H2 254 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 FRRS1Q6ZNA5 592 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 LRRC74BQ6ZQY2 392 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 MARCH3Q86UD3 253 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 ZNF619Q8N2I2 560 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 ZFP62Q8NB50 900 aaPredicted RBP12.46□□□□□ -0.41
SP140-213ENST00000543928 SLC38A5Q8WUX1 472 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 NTNG2Q96CW9 530 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 SNRNP40Q96DI7 357 aaKnown RBP12.46□□□□□ -0.41
SP140-213ENST00000543928 TMEM19Q96HH6 336 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 TMEM41AQ96HV5 264 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 ZNF597Q96LX8 424 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 SH3GL1Q99961 368 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 TTTY12Q9BZ98 90 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 RTN4RQ9BZR6 473 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 HOXD1Q9GZZ0 328 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 SAP130Q9H0E3 1048 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 RUBCNLQ9H714 662 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 KAT8Q9H7Z6 458 aaKnown RBP12.46□□□□□ -0.41
SP140-213ENST00000543928 A4GALTQ9NPC4 353 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 POLE3Q9NRF9 147 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 BOKQ9UMX3 212 aaPredicted RBP12.46□□□□□ -0.41
SP140-213ENST00000543928 NTNG1Q9Y2I2 539 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 WIF1Q9Y5W5 379 aa12.46□□□□□ -0.41
SP140-213ENST00000543928 LRRC3CA6NJW4 275 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 B8ZZF3 427 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 ALG1L2C9J202 215 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 SCDO00767 359 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 ADAM10O14672 748 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 GNB5O14775 395 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 SNPHO15079 494 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 KIAA0513O60268 411 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 CRYABP02511 175 aaKnown RBP12.45□□□□□ -0.42
SP140-213ENST00000543928 ARAFP10398 606 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 ZNF24P17028 368 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 CRISP3P54108 245 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 GNA13Q14344 377 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 RNFT1Q5M7Z0 435 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 FNDC7Q5VTL7 733 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 TRPM8Q7Z2W7 1104 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 HMGN2P46Q86SG4 172 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 ZNF614Q8N883 585 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 GATSQ8NAP1 163 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 ZNF527Q8NB42 609 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 OR10A6Q8NH74 314 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 NSL1Q96IY1 281 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 HOPXQ9BPY8 73 aaPredicted RBP12.45□□□□□ -0.42
SP140-213ENST00000543928 ECSITQ9BQ95 431 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 GPATCH1Q9BRR8 931 aaKnown RBP12.45□□□□□ -0.42
SP140-213ENST00000543928 SLC38A1Q9H2H9 487 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 TMEM38AQ9H6F2 299 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 ZFP64Q9NPA5 681 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 ASF1BQ9NVP2 202 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 CALML5Q9NZT1 146 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 PPP4R1LQ9P1A2 415 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 KCNE5Q9UJ90 142 aa12.45□□□□□ -0.42
SP140-213ENST00000543928 SPENQ96T58 3664 aaKnown RBP12.45□□□□□ -0.42
SP140-213ENST00000543928 CFAP46Q8IYW2 2715 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 C15orf38-AP3S2A0A0A6YYH1 394 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 CENPVL1A0A0U1RR11 272 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 A0A1W2PQD3 144 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 C17orf51A8MQB3 221 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 FAM166BA8MTA8 275 aa12.44□□□□□ -0.42
SP140-213ENST00000543928 C5orf58C9J3I9 102 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms