RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 PRRG3Q9BZD7 231 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 PLA2G12AQ9BZM1 189 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 POLR2J2Q9GZM3 115 aaKnown RBP15.86■□□□□ 0.13
PTPRO-209ENST00000543886 DSN1Q9H410 356 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 UCKL1Q9NWZ5 548 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 EPHA6Q9UF33 1036 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 KLHL3Q9UH77 587 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 THADAQ6YHU6 1953 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 GON4LQ3T8J9 2241 aa15.86■□□□□ 0.13
PTPRO-209ENST00000543886 IGHV5-51A0A0C4DH38 117 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 SOX1O00570 391 aaPredicted RBP15.85■□□□□ 0.13
PTPRO-209ENST00000543886 INHBBP09529 407 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 DBTP11182 482 aaKnown RBP15.85■□□□□ 0.13
PTPRO-209ENST00000543886 BCKDHBP21953 392 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 FPR3P25089 353 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 GABRA4P48169 554 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 RFX3P48380 749 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 ZNF136P52737 540 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 EPHA4P54764 986 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 MLLT1Q03111 559 aaPredicted RBP15.85■□□□□ 0.13
PTPRO-209ENST00000543886 SRSF5Q13243 272 aaKnown RBP15.85■□□□□ 0.13
PTPRO-209ENST00000543886 SLC46A3Q7Z3Q1 461 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 ADCK1Q86TW2 530 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 NRMQ8IXM6 262 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 C1orf216Q8TAB5 229 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 TMEM80Q96HE8 168 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 AHCYL2Q96HN2 611 aaKnown RBP15.85■□□□□ 0.13
PTPRO-209ENST00000543886 DGAT2Q96PD7 388 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 SLC38A2Q96QD8 506 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 ALOXE3Q9BYJ1 711 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 FOLH1BQ9HBA9 442 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 KNL1Q8NG31 2342 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 TRAPPC13A5PLN9 417 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 CDHR4A6H8M9 788 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 MAGEB3O15480 346 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 HRO43593 1189 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 PIAS2O75928 621 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 THY1P04216 161 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 GADD45AP24522 165 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 CSTF2P33240 577 aaKnown RBP eCLIP15.85■□□□□ 0.13
PTPRO-209ENST00000543886 STAT5AP42229 794 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 GPR4P46093 362 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 FNTBP49356 437 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 BMXP51813 675 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 MLLT10P55197 1068 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 SYT14P1Q58G82 188 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 SLC25A30Q5SVS4 291 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 NKAIN2Q5VXU1 208 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 BCDIN3DQ7Z5W3 292 aaKnown RBP15.85■□□□□ 0.13
PTPRO-209ENST00000543886 C11orf74Q86VG3 221 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 METTL27Q8N6F8 245 aaPredicted RBP15.85■□□□□ 0.13
PTPRO-209ENST00000543886 HOXB13Q92826 284 aaPredicted RBP15.85■□□□□ 0.13
PTPRO-209ENST00000543886 OSTF1Q92882 214 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 ZHX1-C8orf76Q96EF9 292 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 LRR1Q96L50 414 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 CD180Q99467 661 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 LMF2Q9BU23 707 aaKnown RBP15.85■□□□□ 0.13
PTPRO-209ENST00000543886 TEX12Q9BXU0 123 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 NLGN3Q9NZ94 848 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 KCNE5Q9UJ90 142 aa15.85■□□□□ 0.13
PTPRO-209ENST00000543886 TGFBR3LH3BV60 316 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 KCNK2O95069 426 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 NADKO95544 446 aaPredicted RBP15.84■□□□□ 0.13
PTPRO-209ENST00000543886 RPLP0P05388 317 aaKnown RBP15.84■□□□□ 0.13
PTPRO-209ENST00000543886 GKN3PP0CG01 181 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 S1PR1P21453 382 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 RNF144AP50876 292 aaPredicted RBP15.84■□□□□ 0.13
PTPRO-209ENST00000543886 ERV3-1Q14264 604 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 NCF4Q15080 339 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 FLYWCH1Q4VC44 716 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 DYNC2LI1Q8TCX1 351 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 SNRNP27Q8WVK2 155 aaKnown RBP15.84■□□□□ 0.13
PTPRO-209ENST00000543886 RAB33BQ9H082 229 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 LRIT1Q9P2V4 623 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 ERGIC3Q9Y282 383 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 RNF215Q9Y6U7 377 aa15.84■□□□□ 0.13
PTPRO-209ENST00000543886 BCAT2O15382 392 aaPredicted RBP15.83■□□□□ 0.13
PTPRO-209ENST00000543886 PIP5K1CO60331 668 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 ADRA2AP08913 450 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 PRG2P13727 222 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 SSTR4P31391 388 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 RGS6P49758 472 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 AFF3P51826 1226 aaKnown RBP15.83■□□□□ 0.13
PTPRO-209ENST00000543886 IGLV3-21P80748 117 aaPredicted RBP15.83■□□□□ 0.13
PTPRO-209ENST00000543886 GRM7Q14831 915 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 ZC3H14Q6PJT7 736 aaKnown RBP15.83■□□□□ 0.13
PTPRO-209ENST00000543886 SLC34A3Q8N130 599 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 OR8D4Q8NGM9 314 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 CLDN23Q96B33 292 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 ZNF582Q96NG8 517 aaPredicted RBP15.83■□□□□ 0.13
PTPRO-209ENST00000543886 OR5M11Q96RB7 305 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 CHRNA10Q9GZZ6 450 aa15.83■□□□□ 0.13
PTPRO-209ENST00000543886 TESQ9UGI8 421 aaKnown RBP15.83■□□□□ 0.13
PTPRO-209ENST00000543886 SNTNA6NMZ2 147 aa15.83■□□□□ 0.12
PTPRO-209ENST00000543886 ZNF749O43361 778 aa15.83■□□□□ 0.12
PTPRO-209ENST00000543886 FMO6PO60774 539 aa15.83■□□□□ 0.12
PTPRO-209ENST00000543886 PRAMEF2O60811 474 aa15.83■□□□□ 0.12
PTPRO-209ENST00000543886 FOSL2P15408 326 aa15.83■□□□□ 0.12
PTPRO-209ENST00000543886 GNSP15586 552 aa15.83■□□□□ 0.12
PTPRO-209ENST00000543886 HTR2AP28223 471 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms