RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 NIPSNAP1Q9BPW8 284 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 ASF1BQ9NVP2 202 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 FBXL12Q9NXK8 326 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 TRBV4-1A0A0J9YWV2 114 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 PRSS3P35030 304 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 PLEKHN1Q494U1 663 aaPredicted RBP18.27■□□□□ 0.52
SUDS3-204ENST00000543473 TNFRSF12AQ9NP84 129 aa18.27■□□□□ 0.52
SUDS3-204ENST00000543473 POLR1CO15160 346 aaPredicted RBP18.27■□□□□ 0.51
SUDS3-204ENST00000543473 ARAFP10398 606 aa18.27■□□□□ 0.51
SUDS3-204ENST00000543473 PIM1P11309 404 aaPredicted RBP18.27■□□□□ 0.51
SUDS3-204ENST00000543473 RPS25P62851 125 aaKnown RBP18.27■□□□□ 0.51
SUDS3-204ENST00000543473 ELOAQ14241 798 aaKnown RBP18.27■□□□□ 0.51
SUDS3-204ENST00000543473 FIGNL1Q6PIW4 674 aa18.27■□□□□ 0.51
SUDS3-204ENST00000543473 WDR53Q7Z5U6 358 aaPredicted RBP18.27■□□□□ 0.51
SUDS3-204ENST00000543473 MFSD8Q8NHS3 518 aa18.27■□□□□ 0.51
SUDS3-204ENST00000543473 NUDT8Q8WV74 236 aa18.27■□□□□ 0.51
SUDS3-204ENST00000543473 LRIG1Q96JA1 1093 aa18.27■□□□□ 0.51
SUDS3-204ENST00000543473 NECAB3Q96P71 396 aaPredicted RBP18.27■□□□□ 0.51
SUDS3-204ENST00000543473 CMKLR1Q99788 373 aa18.27■□□□□ 0.51
SUDS3-204ENST00000543473 AKIP1Q9NQ31 210 aa18.27■□□□□ 0.51
SUDS3-204ENST00000543473 PRDM9Q9NQV7 894 aa18.27■□□□□ 0.51
SUDS3-204ENST00000543473 KLHL42Q9P2K6 505 aa18.27■□□□□ 0.51
SUDS3-204ENST00000543473 ACOT7O00154 380 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 AOAHP28039 575 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 RPS19P39019 145 aaKnown RBP18.26■□□□□ 0.51
SUDS3-204ENST00000543473 SLC6A9P48067 706 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 FCN2Q15485 313 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 DOK4Q8TEW6 326 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 RNF167Q9H6Y7 350 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 VNN3Q9NY84 501 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 FAM183AA6NL82 134 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 POM121CA8CG34 1229 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 CASC3O15234 703 aaKnown RBP18.26■□□□□ 0.51
SUDS3-204ENST00000543473 SMAD6O43541 496 aaKnown RBP18.26■□□□□ 0.51
SUDS3-204ENST00000543473 HNRNPA1P09651 372 aaKnown RBP eCLIP18.26■□□□□ 0.51
SUDS3-204ENST00000543473 GPR143P51810 404 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 DEFB103AP81534 67 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 CDC20Q12834 499 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 PGBD5Q8N414 524 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 OR56B4Q8NH76 319 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 ASB11Q8WXH4 323 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 NDUFAF4Q9P032 175 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 PCDHGA6Q9Y5G7 932 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 BORCS7-ASMTA0A0B4J1R7 106 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 C1orf196B1AJZ1 125 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 NPIPA5E9PKD4 350 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 KHNYNO15037 678 aaKnown RBP18.26■□□□□ 0.51
SUDS3-204ENST00000543473 CSTBP04080 98 aaKnown RBP18.26■□□□□ 0.51
SUDS3-204ENST00000543473 CTSAP10619 480 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 ADH6P28332 368 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 ANKRD34AQ69YU3 496 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 OLIG1Q8TAK6 271 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 ZMYND19Q96E35 227 aaPredicted RBP18.26■□□□□ 0.51
SUDS3-204ENST00000543473 ELOVL2Q9NXB9 296 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 CLEC4EQ9ULY5 219 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 NPIPA1Q9UND3 350 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 HYKKA2RU49 373 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 VEGFDO43915 354 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 AHSA1O95433 338 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 LATS1O95835 1130 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 SLC14A2Q15849 920 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 ALG1LQ6GMV1 187 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 SBSNQ6UWP8 590 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 GIMAP1Q8WWP7 306 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 GAL3ST3Q96A11 431 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 PINK1Q9BXM7 581 aa18.26■□□□□ 0.51
SUDS3-204ENST00000543473 SMLR1H3BR10 107 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 CLEC2LP0C7M8 214 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 PRKCAP17252 672 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 CCKBRP32239 447 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 CD70P32970 193 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 AHRP35869 848 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 MAPK14Q16539 360 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 KLHDC8AQ8IYD2 350 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 CLCC1Q96S66 551 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 SORBS1Q9BX66 1292 aaKnown RBP18.25■□□□□ 0.51
SUDS3-204ENST00000543473 EIF5A2Q9GZV4 153 aaKnown RBP18.25■□□□□ 0.51
SUDS3-204ENST00000543473 NOX3Q9HBY0 568 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 HCSTQ9UBK5 93 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 PPP1R3DO95685 299 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 JUNDP17535 347 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 NKX3-2P78367 333 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 FCRLBQ6BAA4 426 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 SSX6Q7RTT6 188 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 ARL11Q969Q4 196 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 CPNE2Q96FN4 548 aaPredicted RBP18.25■□□□□ 0.51
SUDS3-204ENST00000543473 ORAI3Q9BRQ5 295 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 CXCL16Q9H2A7 254 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 SLC7A7Q9UM01 511 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 TCRBV5S2A0A599 114 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 C11orf98E9PRG8 122 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 TNFRSF10BO14763 440 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 MASP1P48740 699 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 AMZ1Q400G9 498 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 CASD1Q96PB1 797 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 SLC38A3Q99624 504 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 EPHA6Q9UF33 1036 aa18.25■□□□□ 0.51
SUDS3-204ENST00000543473 RNF13O43567 381 aa18.24■□□□□ 0.51
SUDS3-204ENST00000543473 HMGN2P05204 90 aaKnown RBP18.24■□□□□ 0.51
SUDS3-204ENST00000543473 SBK3P0C264 359 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms