RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TJP1Q07157 1748 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 CACNA1SQ13698 1873 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TNFRSF10CO14798 259 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 PENKP01210 267 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 C8BP07358 591 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 RHCEP18577 417 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ITIH1P19827 911 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 FUT4P22083 530 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 GALP22466 123 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 DCDC1P59894 354 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 PITPNAQ00169 270 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ASB18Q6ZVZ8 466 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 RHOUQ7L0Q8 258 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ARMC10Q8N2F6 343 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 LSMEM1Q8N8F7 131 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 GIMAP1Q8WWP7 306 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM41AQ96HV5 264 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 ADOQ96SZ5 270 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 PITX2Q99697 317 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 HIPK2Q9H2X6 1198 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 NGBQ9NPG2 151 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TM7SF3Q9NS93 570 aa6.51□□□□□ -1.37
SRGAP1-206ENST00000543397 TRAPPC13A5PLN9 417 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 OR2T1O43869 369 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 CD36P16671 472 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 HTR1EP28566 365 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 PRDX3P30048 256 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 ECHS1P30084 290 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 EIF2B2P49770 351 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 GPLD1P80108 840 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 GPR18Q14330 331 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 C14orf28Q4W4Y0 310 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 WFDC5Q8TCV5 224 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 DNAJA4Q8WW22 397 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 OR5B2Q96R09 309 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 TTTY10Q9BZA0 68 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC25A18Q9H1K4 315 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 CDC14CA4D256 554 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 SULT2B1O00204 365 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 ANKRD28O15084 1053 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 GPR75O95800 540 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 POU3F2P20265 443 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC5A2P31639 672 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 MAGEA6P43360 314 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 MLLT10P55197 1068 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 MVKQ03426 396 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 TYSND1Q2T9J0 566 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 LRFN4Q6PJG9 635 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 THAP4Q8WY91 577 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 TMED9Q9BVK6 235 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 UCKL1Q9NWZ5 548 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 TMPRSS11EQ9UL52 423 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 ATXN7L1Q9ULK2 861 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 MAST2Q6P0Q8 1798 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 MICAL3Q7RTP6 2002 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 IGLV3-10A0A075B6K4 115 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 A0A0X1KG70 313 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 FAM189A1O60320 539 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 MRPL3P09001 348 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 F8A1P23610 371 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 GLP1RP43220 463 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 RORCP51449 518 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 UBE2KP61086 200 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 OCLNQ16625 522 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 RNF220Q5VTB9 566 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 IL20RBQ6UXL0 311 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC44A3Q8N4M1 653 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 OR2T4Q8NH00 348 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 METTL2AQ96IZ6 378 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 SSX3Q99909 188 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 AIFM2Q9BRQ8 373 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 UTP23Q9BRU9 249 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 TWSG1Q9GZX9 223 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM9BQ9NQ34 198 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 TRBV23-1A0A0A0MS06 115 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF891A8MT65 544 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 FOXD2O60548 495 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 ENTPD6O75354 484 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 HMGN2P05204 90 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 RPS17P08708 135 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 NAA10P41227 235 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 KIAA1024LP59773 190 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 RAB2AP61019 212 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 TRA2BP62995 288 aaKnown RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 ACTC1P68032 377 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 ACTA1P68133 377 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 CDKL1Q00532 357 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 RPS26P11Q5JNZ5 115 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 GRAMD2AQ8IUY3 354 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF595Q8IYB9 648 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 FAM160A2Q8N612 972 aaPredicted RBP6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 TEX26Q8N6G2 289 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 CNEP1R1Q8N9A8 125 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 OR51Q1Q8NH59 317 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 RAB2BQ8WUD1 216 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 C15orf40Q8WUR7 153 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 RSC1A1Q92681 617 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 FGF14Q92915 247 aa6.5□□□□□ -1.37
SRGAP1-206ENST00000543397 NT5C3BQ969T7 300 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms