RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 AAGABQ6PD74 315 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZCCHC12Q6PEW1 402 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZNF781Q8N8C0 355 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 OR4C3Q8NH37 302 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZFP28Q8NHY6 868 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 WNT2BQ93097 391 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MS4A4EQ96PG1 132 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SORT1Q99523 831 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZNF559Q9BR84 538 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 C3orf14Q9HBI5 128 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SLC24A3Q9HC58 644 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SDHAF3Q9NRP4 125 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CRIM1Q9NZV1 1036 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MRTO4Q9UKD2 239 aaKnown RBP11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZNF337Q9Y3M9 751 aa11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 NIPBLQ6KC79 2804 aaeCLIP11.85□□□□□ -0.51
TNFRSF1A-215ENST00000543359 OR2M5A3KFT3 312 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 WDR91A4D1P6 747 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ALG1L2C9J202 215 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 H0Y3Z8 333 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 H0YC42 278 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 RGS16O15492 202 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SKAP2O75563 359 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CTAG2O75638 210 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 OXSR1O95747 527 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ANGPTL1O95841 491 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SERPINE1P05121 402 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 HMGN2P05204 90 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 HK1P19367 917 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TBXA2RP21731 343 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TCEA1P23193 301 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 MAPK1P28482 360 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 UQCRC1P31930 480 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 HPCAL1P37235 193 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 RFX3P48380 749 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SUCLG1P53597 346 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 PSMD4P55036 377 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TPD52P55327 224 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 EMX2Q04743 252 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 STX5Q13190 355 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 GANABQ14697 944 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CHI3L2Q15782 390 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 GLYR1Q49A26 553 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 VPS26BQ4G0F5 336 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ATP6AP1LQ52LC2 224 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CPTPQ5TA50 214 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 GALNT10Q86SR1 603 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CDH24Q86UP0 819 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZZZ3Q8IYH5 903 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 OR5M1Q8NGP8 315 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 FBXO30Q8TB52 745 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 OR5P2Q8WZ92 322 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 SLC9A6Q92581 669 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZBTB9Q96C00 473 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZFP3Q96NJ6 502 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ZIM3Q96PE6 472 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TM9SF2Q99805 663 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 KLHDC3Q9BQ90 382 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 YIPF4Q9BSR8 244 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 CXorf36Q9H7Y0 433 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 GPATCH2Q9NW75 528 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 ASIC5Q9NY37 505 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 HAO1Q9UJM8 370 aa11.84□□□□□ -0.51
TNFRSF1A-215ENST00000543359 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 A0A1W2PRB8 838 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ESPNB1AK53 854 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 TM9SF1O15321 606 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 TNFSF13O75888 250 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 TMIGD3P0DMS9 266 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 G6PDP11413 515 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PEPDP12955 493 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PRPS1L1P21108 318 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 RPL3P39023 403 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 KIR2DL3P43628 341 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CLDN20P56880 219 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ABCE1P61221 599 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 C17orf67Q0P5P2 114 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 MYBPHQ13203 477 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SMU1Q2TAY7 513 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 FIGNL1Q6PIW4 674 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CAMKMTQ7Z624 323 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 FNDC5Q8NAU1 212 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 INTS12Q96CB8 462 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 TUBGCP3Q96CW5 907 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 OTUB1Q96FW1 271 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PGM2Q96G03 612 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 STACQ99469 402 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NPAS1Q99742 590 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SFXN3Q9BWM7 321 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 BTBD2Q9BX70 525 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 AKTIPQ9H8T0 292 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 DUSP22Q9NRW4 184 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GIN1Q9NXP7 522 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 FOXD3Q9UJU5 478 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ACTL7BQ9Y614 415 aa11.83□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ACANP16112 2415 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SHISA8B8ZZ34 492 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 LINC01387J3KSC0 135 aa11.82□□□□□ -0.52
TNFRSF1A-215ENST00000543359 HSPA4LO95757 839 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms