RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SUCOQ9UBS9 1254 aaKnown RBP21.22■□□□□ 0.99
HOMER3-205ENST00000542541 USP22Q9UPT9 525 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 ICOSLGO75144 302 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 SERPINB7O75635 380 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 F10P00742 488 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 DCTP40126 519 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 BNIP2Q12982 314 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 KCNAB2Q13303 367 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 ASRGL1Q7L266 308 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 OR4C3Q8NH37 302 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.22■□□□□ 0.997e-6■□□□□ 11.3
HOMER3-205ENST00000542541 ABCG2Q9UNQ0 655 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 CHCHD2Q9Y6H1 151 aaPredicted RBP21.22■□□□□ 0.99
HOMER3-205ENST00000542541 DSPPQ9NZW4 1301 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 ITPR1Q14643 2758 aa21.22■□□□□ 0.99
HOMER3-205ENST00000542541 SCDO00767 359 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 P04436 131 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 ZNF141Q15928 474 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 COL28A1Q2UY09 1125 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 GRAMD1BQ3KR37 738 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 LINC00303Q3SY05 128 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 RPS26P11Q5JNZ5 115 aaPredicted RBP21.21■□□□□ 0.99
HOMER3-205ENST00000542541 SPINK14Q6IE38 97 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 TMEM81Q6P7N7 255 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 OLIG3Q7RTU3 272 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 FAM156AQ8NDB6 213 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 NODALQ96S42 347 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 METTL7AQ9H8H3 244 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 GMPR2Q9P2T1 348 aaKnown RBP21.21■□□□□ 0.99
HOMER3-205ENST00000542541 ZNF232Q9UNY5 417 aa21.21■□□□□ 0.99
HOMER3-205ENST00000542541 EPG5Q9HCE0 2579 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 AGAP5A6NIR3 686 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 NPIPB9F8W1W9 429 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 CXCR6O00574 342 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 NEURL1O76050 574 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 ZIC2O95409 532 aaPredicted RBP21.2■□□□□ 0.98
HOMER3-205ENST00000542541 IFNA14P01570 189 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 CD46P15529 392 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 AQP1P29972 269 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 PCBP3P57721 371 aaKnown RBP21.2■□□□□ 0.98
HOMER3-205ENST00000542541 SNTA1Q13424 505 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 TBCELQ5QJ74 424 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 DESI1Q6ICB0 168 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 PGM2L1Q6PCE3 622 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 CCDC80Q76M96 950 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 PSD4Q8NDX1 1056 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 TBL1XR1Q9BZK7 514 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 MUC13Q9H3R2 512 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 HHATLQ9HCP6 504 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 SH2D2AQ9NP31 389 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 SACM1LQ9NTJ5 587 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 IFT52Q9Y366 437 aa21.2■□□□□ 0.98
HOMER3-205ENST00000542541 ANKRD33BA6NCL7 494 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 RRP9O43818 475 aaKnown RBP21.19■□□□□ 0.98
HOMER3-205ENST00000542541 FADS1O60427 444 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 SLC25A12O75746 678 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 UGT2B17O75795 530 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 PDE5AO76074 875 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 OXSR1O95747 527 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-205ENST00000542541 DBIP07108 87 aaKnown RBP21.19■□□□□ 0.98
HOMER3-205ENST00000542541 GGT1P19440 569 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 ENDOUP21128 410 aaKnown RBP21.19■□□□□ 0.98
HOMER3-205ENST00000542541 EVI2BP34910 448 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 TNFSF10P50591 281 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 TRIM25Q14258 630 aaKnown RBP21.19■□□□□ 0.98
HOMER3-205ENST00000542541 FXNQ16595 210 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 MDGA2Q7Z553 956 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 ZNF227Q86WZ6 799 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 PTRH1Q86Y79 214 aaKnown RBP21.19■□□□□ 0.98
HOMER3-205ENST00000542541 FIG4Q92562 907 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 CLPTM1LQ96KA5 538 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 C5orf34Q96MH7 638 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 SIGLEC12Q96PQ1 595 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 KLRF1Q9NZS2 232 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 EGFL7Q9UHF1 273 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 MAGEL2Q9UJ55 1249 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 DTNAQ9Y4J8 743 aa21.19■□□□□ 0.98
HOMER3-205ENST00000542541 GPC6Q9Y625 555 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-205ENST00000542541 PRAMEF25A6NGN4 478 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 ALG1L2C9J202 215 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 H3BNH8 94 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 M0QX08 132 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 DPM1O60762 260 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 STAMBPO95630 424 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 FAM87AP0C7U9 286 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 IL7RP16871 459 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 KDELR2P33947 212 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 CASP3P42574 277 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 LARS2Q15031 903 aaKnown RBP21.18■□□□□ 0.98
HOMER3-205ENST00000542541 KLHL26Q53HC5 615 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 GLYATQ6IB77 296 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 SLC30A6Q6NXT4 461 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 ULK2Q8IYT8 1036 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 POGLUT1Q8NBL1 392 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 MDS2Q8NDY4 140 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 OR52P1PQ8NH57 321 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 C9orf43Q8TAL5 461 aaPredicted RBP21.18■□□□□ 0.98
HOMER3-205ENST00000542541 SLC26A7Q8TE54 656 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 GRHL3Q8TE85 626 aa21.18■□□□□ 0.98
HOMER3-205ENST00000542541 ZG16BQ96DA0 208 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms