RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 BDH1Q02338 343 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 EIF2B5Q13144 721 aaKnown RBP9.2□□□□□ -0.94
SS18-205ENST00000542420 LTB4RQ15722 352 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 DCST2Q5T1A1 773 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 NXNL2Q5VZ03 156 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 ZNF613Q6PF04 617 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 ZNF620Q6ZNG0 422 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 MED25Q71SY5 747 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 GDF7Q7Z4P5 450 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 BTLAQ7Z6A9 289 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 GID4Q8IVV7 300 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 NLGN4XQ8N0W4 816 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 SLC34A3Q8N130 599 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 SLC44A3Q8N4M1 653 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 CSNK1A1LQ8N752 337 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 CCL4L1Q8NHW4 92 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 FAM3CQ92520 227 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 KAT2AQ92830 837 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 CDS1Q92903 461 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 LRR1Q96L50 414 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 CCNL2Q96S94 520 aaPredicted RBP9.2□□□□□ -0.94
SS18-205ENST00000542420 PELOQ9BRX2 385 aaKnown RBP9.2□□□□□ -0.94
SS18-205ENST00000542420 YIPF4Q9BSR8 244 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 ALOXE3Q9BYJ1 711 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 SLC6A14Q9UN76 642 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 SSR3Q9UNL2 185 aa9.2□□□□□ -0.94
SS18-205ENST00000542420 SCN3AQ9NY46 2000 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 COL5A1P20908 1838 aaPredicted RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 LILRA5A6NI73 299 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 CHST10O43529 356 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 TLX2O43763 284 aaPredicted RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 TPST2O60704 377 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 ZNF217O75362 1048 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 ZIC2O95409 532 aaPredicted RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 PTTG1O95997 202 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 RBM34P42696 430 aaKnown RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 PSMD4P55036 377 aaKnown RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 MGAT2Q10469 447 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 DUSP5Q16690 384 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 PGGHGQ32M88 737 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 DEFB134Q4QY38 66 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 C6orf132Q5T0Z8 1188 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 GARNL3Q5VVW2 1013 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 ACSM5Q6NUN0 579 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 ARMC6Q6NXE6 501 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 RFPL4BQ6ZWI9 263 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 SYT13Q7L8C5 426 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 PRICKLE2Q7Z3G6 844 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 RD3Q7Z3Z2 195 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 CCDC190Q86UF4 302 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 CMIPQ8IY22 773 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 ARHGEF39Q8N4T4 335 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 SLC16A11Q8NCK7 471 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 PSD4Q8NDX1 1056 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 OR13H1Q8NG92 308 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 TP53INP1Q96A56 240 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 ZNF559Q9BR84 538 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 CHCHD6Q9BRQ6 235 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 INPP5EQ9NRR6 644 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 MAT2BQ9NZL9 334 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 SSUH2Q9Y2M2 353 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 A0A1W2PPC4 97 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 SURF4O15260 269 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 BRINP1O60477 761 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 IGHA1P01876 353 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 CD53P19397 219 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 FGF9P31371 208 aaPredicted RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 SOX18P35713 384 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 CRYBB2P43320 205 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 MTNR1AP48039 350 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 RORCP51449 518 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 ZNF136P52737 540 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 CTBP2P56545 445 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 POU6F2P78424 691 aaPredicted RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 GPR50Q13585 617 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 DSG2Q14126 1118 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 AADACL4Q5VUY2 407 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 PARGQ86W56 976 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 CARFQ8N187 725 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 SLC22A18ASQ8N1D0 253 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 Q8N9G6 341 aaPredicted RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 SPERTQ8NA61 448 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 OR2T33Q8NG76 320 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 OR52N1Q8NH53 320 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 SETD6Q8TBK2 473 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 ZCCHC10Q8TBK6 192 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 SLC37A2Q8TED4 501 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 CHAC2Q8WUX2 184 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 ZNF285Q96NJ3 590 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 GPA33Q99795 319 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 EQTNQ9NQ60 294 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 HRASLS2Q9NWW9 162 aa9.19□□□□□ -0.94
SS18-205ENST00000542420 WSB2Q9NYS7 404 aaPredicted RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 ZNF223Q9UK11 482 aaPredicted RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 MRPS33Q9Y291 106 aaKnown RBP9.19□□□□□ -0.94
SS18-205ENST00000542420 CDHR4A6H8M9 788 aa9.18□□□□□ -0.94
SS18-205ENST00000542420 M0R129 80 aa9.18□□□□□ -0.94
SS18-205ENST00000542420 GPX5O75715 221 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms