RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ZNF79Q15937 498 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 AP5B1Q2VPB7 878 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 CCSMST1Q4G0I0 132 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 CPZQ66K79 652 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 TMEM220Q6QAJ8 160 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 LHFPL2Q6ZUX7 228 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 ZFAND4Q86XD8 727 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 ENTHD1Q8IYW4 607 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 PLA2G15Q8NCC3 412 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 ZNF548Q8NEK5 533 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 SNX33Q8WV41 574 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 MTERF3Q96E29 417 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 COX14Q96I36 57 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 LINC00615Q96LM1 132 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 LMF1Q96S06 567 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 LDAHQ9H6V9 325 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 ASIC5Q9NY37 505 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 LIPT1Q9Y234 373 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 TICRRQ7Z2Z1 1910 aa7.51□□□□□ -1.21
PDLIM5-221ENST00000542407 POM121BA6NF01 834 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ANKDD1BA6NHY2 528 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 RHPN2P1A8MT19 583 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 M0R129 80 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 SCAMP2O15127 329 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 IFNA4P05014 189 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 CD3GP09693 182 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 EFNA1P20827 205 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 CD72P21854 359 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 POU1F1P28069 291 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 MSX1P28360 303 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 LTBRP36941 435 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 DYRK1AQ13627 763 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 SMCO1Q147U7 214 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ITPRIPL2Q3MIP1 535 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ATAT1Q5SQI0 421 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 LCN1P1Q5VSP4 162 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 MEDAGQ5VYS4 303 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ETFRF1Q6IPR1 90 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 XKRXQ6PP77 449 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC36A4Q6YBV0 504 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 NUDT13Q86X67 352 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 YAF2Q8IY57 180 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 APH1BQ8WW43 257 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 DIRAS2Q96HU8 199 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 C5orf34Q96MH7 638 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ASPNQ9BXN1 380 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ADAM19Q9H013 955 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 TSPAN10Q9H1Z9 355 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 OR2AG1Q9H205 316 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 KCNH6Q9H252 994 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 NIPAL2Q9H841 368 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 BIN3Q9NQY0 253 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 KLHL1Q9NR64 748 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 BABAM2Q9NXR7 383 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 SERGEFQ9UGK8 458 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 C19orf53Q9UNZ5 99 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 POLR3HQ9Y535 204 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 FABP12A6NFH5 140 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 WASHC1A8K0Z3 465 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 B4E171 279 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 C1QTNF3-AMACRE9PGA6 284 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 NPIPB8E9PQR5 432 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 PDE9AO76083 593 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 CLDN9O95484 217 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ALPPP05187 535 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 CD22P20273 847 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 CRABP1P29762 137 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 RPS19P39019 145 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ETV6P41212 452 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 BDKRB1P46663 353 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ADAMTSL4Q6UY14 1074 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 OR5T2Q8NGG2 359 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 SKA2Q8WVK7 121 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 DNAJA4Q8WW22 397 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 GGHQ92820 318 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 FAM131CQ96AQ9 280 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 MSLNLQ96KJ4 702 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 OR5M11Q96RB7 305 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 SRRQ9GZT4 340 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 PDE7BQ9NP56 450 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 NLKQ9UBE8 527 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 KLHL21Q9UJP4 597 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 NDRG4Q9ULP0 352 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 GPR55Q9Y2T6 319 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ZNF451Q9Y4E5 1061 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 V9GYH0 126 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 AHRRA9YTQ3 701 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 SLC28A1O00337 649 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 MID1O15344 667 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 EIF3GO75821 320 aaKnown RBP eCLIP7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 PDYNP01213 254 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 APODP05090 189 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 PRPH2P23942 346 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 GPR1P46091 355 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ALDH9A1P49189 494 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 HMGCS1Q01581 520 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 RGS1Q08116 209 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 ST3GAL4Q11206 333 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 NPRL3Q12980 569 aa7.5□□□□□ -1.21
PDLIM5-221ENST00000542407 MAB21L1Q13394 359 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms