RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 ZNF232Q9UNY5 417 aa16■□□□□ 0.15
TMEM50B-210ENST00000542230 IFT52Q9Y366 437 aa16■□□□□ 0.15
TMEM50B-210ENST00000542230 A0A1W2PPW3 197 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 RGS10O43665 173 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 FOXD2O60548 495 aaPredicted RBP15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 CLPSP04118 112 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 CT45A8P0DMV1 189 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 CT45A9P0DMV2 189 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 GNSP15586 552 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 STT3AP46977 705 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 CT45A2Q5DJT8 189 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 ACSM5Q6NUN0 579 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 C1orf94Q6P1W5 598 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 PTCHD4Q6ZW05 846 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 SLC41A3Q96GZ6 507 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 SLC41A2Q96JW4 573 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 CHRNA10Q9GZZ6 450 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 KLHL28Q9NXS3 571 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 WARS2Q9UGM6 360 aaKnown RBP15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 IL20RAQ9UHF4 553 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 PSORS1C1Q9UIG5 152 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 SLC7A7Q9UM01 511 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 SATB2Q9UPW6 733 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 MN1Q10571 1320 aaPredicted RBP15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 A0A1W2PQM1 296 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 LAMTOR5O43504 91 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 STSP08842 583 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 HOXA6P31267 233 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 LPAL2Q16609 132 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 FLYWCH1Q4VC44 716 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 ZNF730Q6ZMV8 503 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 PRR23CQ6ZRP0 262 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 SHISA6Q6ZSJ9 500 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 ZBTB46Q86UZ6 589 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 WDR5BQ86VZ2 330 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 CNOT9Q92600 299 aaKnown RBP15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 HOXB13Q92826 284 aaPredicted RBP15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 COPS4Q9BT78 406 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 PNO1Q9NRX1 252 aaKnown RBP15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 FGF21Q9NSA1 209 aa15.99■□□□□ 0.15
TMEM50B-210ENST00000542230 A0A1B0GTQ1 180 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 CDHR4A6H8M9 788 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 H0YIG0 161 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 AP3D1O14617 1153 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 NID1P14543 1247 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 FUT1P19526 365 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 ITIH1P19827 911 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 GPR4P46093 362 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 DBPQ10586 325 aaPredicted RBP15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 DOC2BQ14184 412 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 PRPF38BQ5VTL8 546 aaKnown RBP15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 NRMQ8IXM6 262 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 PTPMT1Q8WUK0 201 aaPredicted RBP15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 GAB3Q8WWW8 586 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 CNDP2Q96KP4 475 aaKnown RBP15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 FUNDC2Q9BWH2 189 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 ITPAQ9BY32 194 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 OR10A5Q9H207 317 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 SMOC1Q9H4F8 434 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 VCX3AQ9NNX9 186 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 DNAJC27Q9NZQ0 273 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 TNRC6BQ9UPQ9 1833 aaKnown RBP15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 CCDC163A0A0D9SF12 145 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 ENTPD6O75354 484 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 GCGRP47871 477 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 HSD17B7P56937 341 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 CDC42P60953 191 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 SKP1P63208 163 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 GPLD1P80108 840 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 NR1D2Q14995 579 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 TRAM2Q15035 370 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 NDUFAF6Q330K2 333 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 ZCCHC12Q6PEW1 402 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 ZNF615Q8N8J6 731 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 ZSCAN1Q8NBB4 408 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 B3GNT7Q8NFL0 401 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 OR8D4Q8NGM9 314 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 SLC38A4Q969I6 547 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 FKBP10Q96AY3 582 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 ZNF501Q96CX3 271 aaPredicted RBP15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 TUBA1CQ9BQE3 449 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 LMF2Q9BU23 707 aaKnown RBP15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 GAREM1Q9H706 876 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 ACOT13Q9NPJ3 140 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 NLGN3Q9NZ94 848 aa15.98■□□□□ 0.15
TMEM50B-210ENST00000542230 ZNF99A8MXY4 864 aaPredicted RBP15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 C17orf105B2RV13 164 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 AHCYL1O43865 530 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 SLITRK5O94991 958 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 DBIP07108 87 aaKnown RBP15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 OMPP47874 163 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 ST3GAL3Q11203 375 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 CLEC12AQ5QGZ9 265 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 C1orf210Q8IVY1 113 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 EID2Q8N6I1 236 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 TCEANCQ8N8B7 351 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 SLC38A9Q8NBW4 561 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 RNF217Q8TC41 542 aa15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 SENP5Q96HI0 755 aaPredicted RBP15.97■□□□□ 0.15
TMEM50B-210ENST00000542230 DOK1Q99704 481 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms