RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SLC6A13Q9NSD5 602 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 VAPAQ9P0L0 249 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 PPP4R1LQ9P1A2 415 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 PRDM4Q9UKN5 801 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 AP3M1Q9Y2T2 418 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 C15orf41Q9Y2V0 281 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 WDR45Q9Y484 360 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 CFAP46Q8IYW2 2715 aa17.16■□□□□ 0.34
VPS33A-205ENST00000541169 EML6Q6ZMW3 1958 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 IGLV3-32A0A0A0MS00 114 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 A0A0G2JMM0 328 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 A0A1W2PPB8 328 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 A0A1W2PRS3 328 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 KIR3DP1A8MWS1 328 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 NPIPA5E9PKD4 350 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 G3V3Y1 287 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 OXSR1O95747 527 aaPredicted RBP17.15■□□□□ 0.34
VPS33A-205ENST00000541169 NR2F1P10589 423 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 DCTP40126 519 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 TDGF1P3P51864 188 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 MVDP53602 400 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 CRISP3P54108 245 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 GAS1P54826 345 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 PMP22Q01453 160 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 ZSWIM7Q19AV6 140 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 GPAT3Q53EU6 434 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 KLHL26Q53HC5 615 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 COLEC12Q5KU26 742 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.15■□□□□ 0.34
VPS33A-205ENST00000541169 CCNJQ5T5M9 372 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 ARHGAP11AQ6P4F7 1023 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 LRRC74BQ6ZQY2 392 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 SNX32Q86XE0 403 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 TMEM251Q8N6I4 163 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 OR4C3Q8NH37 302 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 ANKRD27Q96NW4 1050 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 CGREF1Q99674 301 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 CCDC106Q9BWC9 280 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 MYLK2Q9H1R3 596 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 EFCAB1Q9HAE3 211 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 CACYBPQ9HB71 228 aaKnown RBP17.15■□□□□ 0.34
VPS33A-205ENST00000541169 PLSCR2Q9NRY7 297 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 SLC25A37Q9NYZ2 338 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 SUCOQ9UBS9 1254 aaKnown RBP17.15■□□□□ 0.34
VPS33A-205ENST00000541169 NPIPA1Q9UND3 350 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 DTNAQ9Y4J8 743 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 KCNE3Q9Y6H6 103 aa17.15■□□□□ 0.34
VPS33A-205ENST00000541169 C15orf38-AP3S2A0A0A6YYH1 394 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 PINLYPA6NC86 204 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 OR14I1A6ND48 311 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 ANKUB1A6NFN9 424 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 LRRC3CA6NJW4 275 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 NPIPB9F8W1W9 429 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 MRASO14807 208 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 KIAA0513O60268 411 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 UNC5CO95185 931 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 CBX6O95503 412 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 ANGPTL1O95841 491 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 IGHG3P01860 377 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 MST1P26927 711 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 GDF1P27539 372 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 ADH7P40394 386 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 ZNF141Q15928 474 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 ZNF630Q2M218 657 aaPredicted RBP17.14■□□□□ 0.33
VPS33A-205ENST00000541169 RUNDC3AQ59EK9 446 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 RNFT1Q5M7Z0 435 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 BICRALQ6AI39 1079 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 ARPINQ7Z6K5 226 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 CMIPQ8IY22 773 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 ZNF619Q8N2I2 560 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 OR8J3Q8NGG0 315 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 PNPT1Q8TCS8 783 aaKnown RBP17.14■□□□□ 0.33
VPS33A-205ENST00000541169 RAB8BQ92930 207 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 OTUB1Q96FW1 271 aaPredicted RBP17.14■□□□□ 0.33
VPS33A-205ENST00000541169 SPATA9Q9BWV2 254 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 UBQLN3Q9H347 655 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 GALNT9Q9HCQ5 603 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 A4GALTQ9NPC4 353 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 ARMCX1Q9P291 453 aa17.14■□□□□ 0.33
VPS33A-205ENST00000541169 A0A0G2JPF8 293 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 LOC100653049A0A140TA62 436 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 A0A1B0GVC2 190 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 FAM166BA8MTA8 275 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 HNRNPCL2B2RXH8 293 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 HNRNPCL3B7ZW38 293 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 J3QKU1 62 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 FBP2O00757 339 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 NDUFAB1O14561 156 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 HNRNPCL1O60812 293 aaKnown RBP17.13■□□□□ 0.33
VPS33A-205ENST00000541169 KRT34O76011 436 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 HPNP05981 417 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 TFPTP0C1Z6 253 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 HNRNPCL4P0DMR1 293 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 PLA2G2AP14555 144 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 MAGEA5P43359 124 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 CASP6P55212 293 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 GLYR1Q49A26 553 aaPredicted RBP17.13■□□□□ 0.33
VPS33A-205ENST00000541169 CMPK2Q5EBM0 449 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 COX20Q5RI15 118 aa17.13■□□□□ 0.33
VPS33A-205ENST00000541169 FNDC7Q5VTL7 733 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms