RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 HLCSP50747 726 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 TSTA3Q13630 321 aaPredicted RBP4.06□□□□□ -1.76
YBX3-210ENST00000540975 PPP1R7Q15435 360 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 INAQ16352 499 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 IMMTQ16891 758 aaKnown RBP4.06□□□□□ -1.76
YBX3-210ENST00000540975 GLYR1Q49A26 553 aaPredicted RBP4.06□□□□□ -1.76
YBX3-210ENST00000540975 METTL11BQ5VVY1 283 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 CNSTQ6PJW8 725 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 DPY19L2P2Q6ZN68 376 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 TRIML2Q8N7C3 387 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 MLKLQ8NB16 471 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 IPMKQ8NFU5 416 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 C11orf24Q96F05 449 aaPredicted RBP4.06□□□□□ -1.76
YBX3-210ENST00000540975 TECTBQ96PL2 329 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 DPH7Q9BTV6 452 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 C19orf24Q9BVV8 132 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 MTRRQ9UBK8 725 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 SH3BGRL2Q9UJC5 107 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 SHROOM2Q13796 1616 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
YBX3-210ENST00000540975 CCDC18Q5T9S5 1454 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 HFM1A2PYH4 1435 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 UACAQ9BZF9 1416 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 ROCK2O75116 1388 aaKnown RBP4.05□□□□□ -1.76
YBX3-210ENST00000540975 KANK1Q14678 1352 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 TONSLQ96HA7 1378 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 NPIPA2E9PIF3 369 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 ZBTB14O43829 449 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 SDC3O75056 442 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 LRP3O75074 770 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 NOL4O94818 638 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 SYNGR4O95473 234 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 CXCL14O95715 111 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 S100A6P06703 90 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 IGHV1-2P23083 117 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 MSNP26038 577 aaKnown RBP4.05□□□□□ -1.76
YBX3-210ENST00000540975 PBLDP30039 288 aaPredicted RBP4.05□□□□□ -1.76
YBX3-210ENST00000540975 CCL11P51671 97 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 GALK2Q01415 458 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 GBE1Q04446 702 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 SMUG1Q53HV7 270 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 ANGPTL8Q6UXH0 198 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 TOM1L2Q6ZVM7 507 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 C14orf178Q8N769 122 aaPredicted RBP4.05□□□□□ -1.76
YBX3-210ENST00000540975 COLGALT1Q8NBJ5 622 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 OR52K2Q8NGK3 314 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 PSMA8Q8TAA3 256 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 NRBF2Q96F24 287 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 C16orf74Q96GX8 76 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 FAM124BQ9H5Z6 455 aaPredicted RBP4.05□□□□□ -1.76
YBX3-210ENST00000540975 VPS37BQ9H9H4 285 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 ISG20L2Q9H9L3 353 aaKnown RBP4.05□□□□□ -1.76
YBX3-210ENST00000540975 EXOSC3Q9NQT5 275 aaKnown RBP4.05□□□□□ -1.76
YBX3-210ENST00000540975 NDUFA13Q9P0J0 144 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 MBD2Q9UBB5 411 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 SLC2A6Q9UGQ3 507 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 PRELID1Q9Y255 219 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 DHRS7Q9Y394 339 aa4.05□□□□□ -1.76
YBX3-210ENST00000540975 THOC2Q8NI27 1593 aaKnown RBP4.05□□□□□ -1.76
YBX3-210ENST00000540975 YEATS2Q9ULM3 1422 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 DHX29Q7Z478 1369 aaKnown RBP4.04□□□□□ -1.76
YBX3-210ENST00000540975 CCDC7Q96M83 1385 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 GAKO14976 1311 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 ZMYM6O95789 1325 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 TRBV7-9A0A0J9YWB2 115 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 MACROD2A1Z1Q3 448 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 LRIT2A6NDA9 550 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 YEATS4O95619 227 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 HMOX1P09601 288 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 ZP3P21754 424 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 EPS15P42566 896 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 IL18R1Q13478 541 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 ZNF699Q32M78 642 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 ZNF528Q3MIS6 628 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 LGSNQ5TDP6 509 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 DMKNQ6E0U4 476 aaPredicted RBP4.04□□□□□ -1.76
YBX3-210ENST00000540975 CADM2Q8N3J6 435 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 ANKRD20A12PQ8NF67 263 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 CTNNBL1Q8WYA6 563 aaPredicted RBP4.04□□□□□ -1.76
YBX3-210ENST00000540975 UQCC2Q9BRT2 126 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 TSGA10Q9BZW7 698 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 NMUR2Q9GZQ4 415 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 HPF1Q9NWY4 346 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 RPS6KB2Q9UBS0 482 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 FAM153AQ9UHL3 310 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 FLVCR1Q9Y5Y0 555 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 ABCA10Q8WWZ4 1543 aa4.04□□□□□ -1.76
YBX3-210ENST00000540975 INSRP06213 1382 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 KDRP35968 1356 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 FAM231BA6NCW3 169 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 NDC80O14777 642 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 TOXO94900 526 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 GOSR1O95249 250 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 PSMB1P20618 241 aaKnown RBP4.03□□□□□ -1.76
YBX3-210ENST00000540975 MARCKSP29966 332 aaPredicted RBP4.03□□□□□ -1.76
YBX3-210ENST00000540975 ACVR1BP36896 505 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 MNAT1P51948 309 aa4.03□□□□□ -1.76
YBX3-210ENST00000540975 CKAP4Q07065 602 aaKnown RBP4.03□□□□□ -1.76
YBX3-210ENST00000540975 EIF2B1Q14232 305 aaKnown RBP4.03□□□□□ -1.76
YBX3-210ENST00000540975 CAMK4Q16566 473 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms