RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 NKAIN4Q8IVV8 208 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 ENTHD1Q8IYW4 607 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 PRSS33Q8NF86 280 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 CNOT9Q92600 299 aaKnown RBP11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 MCHR1Q99705 422 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 OR8D2Q9GZM6 311 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 FTSJ1Q9UET6 329 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 MKL2Q9ULH7 1088 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 RNF6Q9Y252 685 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 IFT52Q9Y366 437 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 CDHR4A6H8M9 788 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 ARRDC5A6NEK1 342 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 EFCAB7A8K855 629 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 NPIPB9F8W1W9 429 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 PIP5K1CO60331 668 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 WBP4O75554 376 aaKnown RBP11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 DBIP07108 87 aaKnown RBP11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 THBS1P07996 1170 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 CCL4P13236 92 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 NID1P14543 1247 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 MMP11P24347 488 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 CHMP24386 653 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 GALNSP34059 522 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 RPL5P46777 297 aaKnown RBP11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 ALDH3B2P48448 385 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 TAS2R41P59536 307 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 MAD2L1BPQ15013 274 aaPredicted RBP11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 SF3A2Q15428 464 aaKnown RBP11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 NDUFAF6Q330K2 333 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 FAM69BQ5VUD6 431 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 YOD1Q5VVQ6 348 aaPredicted RBP11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 WDR88Q6ZMY6 472 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 PRICKLE2Q7Z3G6 844 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 GDF7Q7Z4P5 450 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 BCORP1Q8N888 145 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 BMPERQ8N8U9 685 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 OR4K5Q8NGD3 323 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 STT3BQ8TCJ2 826 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 SLC2A12Q8TD20 617 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 ADAMTS16Q8TE57 1224 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 HDAC2Q92769 488 aaKnown RBP11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 HRASLS5Q96KN8 279 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 NRSN2Q9GZP1 204 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 ADNPQ9H2P0 1102 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 RASSF1Q9NS23 344 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 ZNF226Q9NYT6 803 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 SLC13A4Q9UKG4 626 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 RARRES3Q9UL19 164 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 TMCC3Q9ULS5 477 aa11.35□□□□□ -0.59
AP003559.1-201ENST00000540906 SLC1A7O00341 560 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 CYP7B1O75881 506 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 CCNYL3P0C7X3 344 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 GGT2P36268 569 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 HLCSP50747 726 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 ZFP36L1Q07352 338 aaKnown RBP11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 TCF15Q12870 199 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 IL18R1Q13478 541 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 LARS2Q15031 903 aaKnown RBP11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 NSDHLQ15738 373 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 NKAIN1Q4KMZ8 207 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 AP1ARQ63HQ0 302 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 DBX2Q6ZNG2 339 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 PLEKHM3Q6ZWE6 761 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 CCDC103Q8IW40 242 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 BPIFB6Q8NFQ5 453 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 NXF5Q9H1B4 397 aaKnown RBP11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 MKKSQ9NPJ1 570 aaPredicted RBP11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 CBLCQ9ULV8 474 aa11.34□□□□□ -0.59
AP003559.1-201ENST00000540906 IGLV3-12A0A075B6K2 115 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 PMS2P1A4D2B8 440 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 KHNYNO15037 678 aaKnown RBP11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 LDOC1O95751 146 aaPredicted RBP11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 AK1P00568 194 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 CDH2P19022 906 aaPredicted RBP11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 RORAP35398 523 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 TARDBPQ13148 414 aaKnown RBP eCLIP11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNHIT3Q15649 155 aaPredicted RBP11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 KIF18BQ86Y91 864 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 C9orf40Q8IXQ3 194 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 PRR22Q8IZ63 422 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 PARP8Q8N3A8 854 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF614Q8N883 585 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 OR4C3Q8NH37 302 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 ADIPOR1Q96A54 375 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 EFHD2Q96C19 240 aaPredicted RBP11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 SLC41A3Q96GZ6 507 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 KLHDC3Q9BQ90 382 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 PRSS27Q9BQR3 290 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 PELOQ9BRX2 385 aaKnown RBP11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 UCK2Q9BZX2 261 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 SLC7A5P2Q9GIP4 190 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 RBM38Q9H0Z9 239 aaKnown RBP11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 DSN1Q9H410 356 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 DNAJB12Q9NXW2 375 aaKnown RBP11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF232Q9UNY5 417 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 SRPK3Q9UPE1 567 aa11.33□□□□□ -0.6
AP003559.1-201ENST00000540906 A0A087WXM4 84 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 CDC14CA4D256 554 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 C17orf51A8MQB3 221 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms