RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 SLX4IPQ5VYV7 408 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 LEG1Q6P5S2 330 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 IL34Q6ZMJ4 242 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 NET1Q7Z628 596 aaPredicted RBP2.19□□□□□ -2.06
MDM2-227ENST00000540709 ZNF589Q86UQ0 364 aaPredicted RBP2.19□□□□□ -2.06
MDM2-227ENST00000540709 CNTN4Q8IWV2 1026 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 SFRP1Q8N474 314 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 MSANTD4Q8NCY6 345 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 ZNF540Q8NDQ6 660 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 TMEM185AQ8NFB2 350 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 FBXO30Q8TB52 745 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 TBX15Q96SF7 602 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 RPAP3Q9H6T3 665 aaPredicted RBP2.19□□□□□ -2.06
MDM2-227ENST00000540709 PNO1Q9NRX1 252 aaKnown RBP2.19□□□□□ -2.06
MDM2-227ENST00000540709 MARCH5Q9NX47 278 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 CYP39A1Q9NYL5 469 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 GALPQ9UBC7 116 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 KCNN3Q9UGI6 736 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 EXOSC1Q9Y3B2 195 aaKnown RBP2.19□□□□□ -2.06
MDM2-227ENST00000540709 CACNG2Q9Y698 323 aa2.19□□□□□ -2.06
MDM2-227ENST00000540709 DHX29Q7Z478 1369 aaKnown RBP2.19□□□□□ -2.06
MDM2-227ENST00000540709 RAI1Q7Z5J4 1906 aaPredicted RBP2.19□□□□□ -2.06
MDM2-227ENST00000540709 IGKV2-28A0A075B6P5 120 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 TTC26A0AVF1 554 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 FBLL1A6NHQ2 334 aaKnown RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 ARHGAP42A6NI28 874 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 ANKRD63C9JTQ0 380 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 DDX39AO00148 427 aaKnown RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 KERAO60938 352 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 CABYRO75952 493 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 TIMP1P01033 207 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 IGKV2D-28P01615 120 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 RALAP11233 206 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 HTR1FP30939 366 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 CDH5P33151 784 aaPredicted RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 RPS10P46783 165 aaKnown RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 DHPSP49366 369 aaPredicted RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 MRPS6P82932 125 aaKnown RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 ACTN3Q08043 901 aaPredicted RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 ZP4Q12836 540 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 CBX3Q13185 183 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 AGKQ53H12 422 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 FAM159AQ6UWV7 190 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 PAQR9Q6ZVX9 377 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 TAF8Q7Z7C8 310 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 ZBTB44Q8NCP5 570 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 CCNYQ8ND76 341 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 RDH5Q92781 318 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 ART4Q93070 314 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 PSMG2Q969U7 264 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 C18orf25Q96B23 403 aaPredicted RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 FGGYQ96C11 551 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 ELMO2Q96JJ3 720 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 CABS1Q96KC9 395 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 SMIM14Q96QK8 99 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 WRAP53Q9BUR4 548 aaKnown RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 ATG10Q9H0Y0 220 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 POLD4Q9HCU8 107 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 CD274Q9NZQ7 290 aa2.18□□□□□ -2.06
MDM2-227ENST00000540709 EIF3LQ9Y262 564 aaKnown RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 STRAPQ9Y3F4 350 aaKnown RBP2.18□□□□□ -2.06
MDM2-227ENST00000540709 A0A0U1RRA0 63 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 TMEM89A2RUT3 159 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 TUBAL3A6NHL2 446 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 ALOX15BO15296 676 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 PPIHO43447 177 aaKnown RBP2.17□□□□□ -2.06
MDM2-227ENST00000540709 ZBTB14O43829 449 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 BBOX1O75936 387 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 SEMG1P04279 462 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 STSP08842 583 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 H2AFXP16104 143 aaPredicted RBP2.17□□□□□ -2.06
MDM2-227ENST00000540709 CCNA2P20248 432 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 UGT1A5P35504 534 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 C17orf67Q0P5P2 114 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 KARSQ15046 597 aaKnown RBP2.17□□□□□ -2.06
MDM2-227ENST00000540709 UBE2V2Q15819 145 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 ZSWIM7Q19AV6 140 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 LRIT3Q3SXY7 679 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 CCDC40Q4G0X9 1142 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 CXCL17Q6UXB2 119 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 BTNL3Q6UXE8 466 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 HACD2Q6Y1H2 254 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 LRRC70Q7Z2Q7 622 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 ADAMTSL2Q86TH1 951 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 IFNEQ86WN2 208 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 IL1F10Q8WWZ1 152 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 HAVCR1Q96D42 359 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 RTBDNQ9BSG5 229 aaPredicted RBP2.17□□□□□ -2.06
MDM2-227ENST00000540709 NFKBIZQ9BYH8 718 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 VCXQ9H320 206 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 NARFLQ9H6Q4 476 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 GDAP2Q9NXN4 497 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 APPL1Q9UKG1 709 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 DNPEPQ9ULA0 475 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.17□□□□□ -2.06
MDM2-227ENST00000540709 WSB1Q9Y6I7 421 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 TEX264Q9Y6I9 313 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 RPGRIP1LQ68CZ1 1315 aa2.17□□□□□ -2.06
MDM2-227ENST00000540709 PARD3Q8TEW0 1356 aa2.16□□□□□ -2.06
MDM2-227ENST00000540709 TRBV6-6A0A0A6YYG2 114 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms