RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 ACP2P11117 423 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.95■□□□□ 0.62
CHFR-217ENST00000540537 PLXDC2Q6UX71 529 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 SPNS3Q6ZMD2 512 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 MEIOBQ8N635 442 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 SLC9A6Q92581 669 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 PIGQQ9BRB3 760 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 GPATCH1Q9BRR8 931 aaKnown RBP18.95■□□□□ 0.62
CHFR-217ENST00000540537 POLDIP3Q9BY77 421 aaKnown RBP18.95■□□□□ 0.62
CHFR-217ENST00000540537 PIGMQ9H3S5 423 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 RASSF1Q9NS23 344 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 ZDHHC2Q9UIJ5 367 aa18.95■□□□□ 0.62
CHFR-217ENST00000540537 NUP214P35658 2090 aaPredicted RBP18.94■□□□□ 0.62
CHFR-217ENST00000540537 ABCA4P78363 2273 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 TUBAL3A6NHL2 446 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 A6NNC1 897 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 ALG1L2C9J202 215 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 LYPLA1O75608 230 aaPredicted RBP18.94■□□□□ 0.62
CHFR-217ENST00000540537 LCN1P31025 176 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 DNAJA1P31689 397 aaKnown RBP18.94■□□□□ 0.62
CHFR-217ENST00000540537 EEFSECP57772 596 aaKnown RBP18.94■□□□□ 0.62
CHFR-217ENST00000540537 DAZAP2Q15038 168 aaPredicted RBP18.94■□□□□ 0.62
CHFR-217ENST00000540537 EXOSC6Q5RKV6 272 aaKnown RBP18.94■□□□□ 0.62
CHFR-217ENST00000540537 C6orf136Q5SQH8 315 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 APOOLQ6UXV4 268 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 CHMP1BQ7LBR1 199 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 GCNT2Q8N0V5 402 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 SLC16A11Q8NCK7 471 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 FAM110BQ8TC76 370 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 FAM120BQ96EK7 910 aaKnown RBP18.94■□□□□ 0.62
CHFR-217ENST00000540537 C3orf30Q96M34 536 aa18.94■□□□□ 0.62
CHFR-217ENST00000540537 RBM24Q9BX46 236 aaKnown RBP18.94■□□□□ 0.62
CHFR-217ENST00000540537 SIRT3Q9NTG7 399 aaPredicted RBP18.94■□□□□ 0.62
CHFR-217ENST00000540537 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.94■□□□□ 0.62
CHFR-217ENST00000540537 V9GYY5 206 aaPredicted RBP18.94■□□□□ 0.62
CHFR-217ENST00000540537 MED13LQ71F56 2210 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 OR2M5A3KFT3 312 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 SKAP2O75563 359 aaPredicted RBP18.93■□□□□ 0.62
CHFR-217ENST00000540537 KCNK2O95069 426 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 TGM6O95932 706 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 CRHP06850 196 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 ALOX5P09917 674 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 EFNA1P20827 205 aaPredicted RBP18.93■□□□□ 0.62
CHFR-217ENST00000540537 PRIM2P49643 509 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 DUSP5Q16690 384 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 KRT71Q3SY84 523 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 OR2A2Q6IF42 318 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 P4HA3Q7Z4N8 544 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 EXOC3L1Q86VI1 746 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 UBQLNLQ8IYU4 475 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 NATD1Q8N6N6 113 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 FNDC5Q8NAU1 212 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 OR7A2PQ8NGA2 310 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 FBXO30Q8TB52 745 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 C1orf50Q9BV19 199 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 CLEC4MQ9H2X3 399 aaPredicted RBP18.93■□□□□ 0.62
CHFR-217ENST00000540537 ZCCHC3Q9NUD5 404 aaKnown RBP18.93■□□□□ 0.62
CHFR-217ENST00000540537 ATAD3AQ9NVI7 634 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 ZNF337Q9Y3M9 751 aa18.93■□□□□ 0.62
CHFR-217ENST00000540537 A0A1W2PNV4 684 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 A0A1W2PRB8 838 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 SLC22A20A6NK97 555 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 CTIFO43310 598 aaKnown RBP18.92■□□□□ 0.62
CHFR-217ENST00000540537 OXSR1O95747 527 aaPredicted RBP18.92■□□□□ 0.62
CHFR-217ENST00000540537 HSPA4LO95757 839 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 LAMP1P11279 417 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 EPXP11678 715 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 TBXA2RP21731 343 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 SERPINB4P48594 390 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 DIO3P55073 304 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 CLDN15P56746 228 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 ZNF844Q08AG5 666 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 PTGR1Q14914 329 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 CPTPQ5TA50 214 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 IL23RQ5VWK5 629 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 NUDCD3Q8IVD9 361 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 COX18Q8N8Q8 333 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 PSMA8Q8TAA3 256 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 PPP1R14CQ8TAE6 165 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 NRGNQ92686 78 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 NINJ1Q92982 152 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 C16orf58Q96GQ5 468 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 GALNT8Q9NY28 637 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 PACSIN3Q9UKS6 424 aa18.92■□□□□ 0.62
CHFR-217ENST00000540537 HRNRQ86YZ3 2850 aaPredicted RBP18.92■□□□□ 0.62
CHFR-217ENST00000540537 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 RGS16O15492 202 aaPredicted RBP18.91■□□□□ 0.62
CHFR-217ENST00000540537 NDUFB5O43674 189 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 ZNF500O60304 480 aaPredicted RBP18.91■□□□□ 0.62
CHFR-217ENST00000540537 TNFRSF21O75509 655 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 TNFSF13O75888 250 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 GOSR1O95249 250 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 CD1EP15812 388 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 CPA2P48052 419 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 SUCLG1P53597 346 aaKnown RBP18.91■□□□□ 0.62
CHFR-217ENST00000540537 OCRLQ01968 901 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 TMEM44Q2T9K0 475 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 FIGNL1Q6PIW4 674 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 GALNT10Q86SR1 603 aa18.91■□□□□ 0.62
CHFR-217ENST00000540537 LUZP2Q86TE4 346 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms