RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 HES5Q5TA89 166 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 SUSD1Q6UWL2 747 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 MBOAT1Q6ZNC8 495 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 ATCAYQ86WG3 371 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 MSRB3Q8IXL7 192 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 CPXM2Q8N436 756 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 ZBTB2Q8N680 514 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 TBC1D20Q96BZ9 403 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 ZC3HAV1LQ96H79 300 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 MIXL1Q9H2W2 232 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 ZFYVE1Q9HBF4 777 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 PRMT8Q9NR22 394 aaPredicted RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 TM7SF3Q9NS93 570 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 PADI2Q9Y2J8 665 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 SNX11Q9Y5W9 270 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 CDH10Q9Y6N8 788 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 OR14I1A6ND48 311 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 SIX6O95475 246 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 RLN1P04808 185 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 EBLN1P0CF75 366 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 RGRP47804 291 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 CENPAP49450 140 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 EVX1P49640 407 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 RPS25P62851 125 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 SELENOWP63302 87 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 FGL1Q08830 312 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 ELAVL3Q14576 367 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.17□□□□□ -1.11e-6■■■■□ 22.5
DDB1-217ENST00000540166 PAN3Q58A45 887 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 ZNF600Q6ZNG1 722 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 LIMS2Q7Z4I7 341 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 LHFPL3Q86UP9 236 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 TNFAIP8L1Q8WVP5 186 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 KAT2AQ92830 837 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 LRR1Q96L50 414 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 C10orf90Q96M02 699 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 NPAS1Q99742 590 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 FAM120CQ9NX05 1096 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 HECAQ9UBI9 543 aaPredicted RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 CFAP20Q9Y6A4 193 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 RRP8O43159 456 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 GDF9O60383 454 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 GATBO75879 557 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 RGS11O94810 467 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 KLHL18O94889 574 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 SPDEFO95238 335 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 KCNK5O95279 499 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 SERPINA3P01011 423 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 IGLV3-25P01717 112 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 FABP1P07148 127 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 ACPPP15309 386 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 PCSK2P16519 638 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 CRYBB2P43320 205 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 HAAOP46952 286 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 AP1S2P56377 157 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 RAB5BP61020 215 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 POLR2LP62875 67 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 OR2G6Q5TZ20 316 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 UBE2R2Q712K3 238 aaPredicted RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 LURAP1LQ8IV03 231 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 CLECL1Q8IZS7 167 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 CHCHD4Q8N4Q1 142 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 GPR156Q8NFN8 814 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 MED8Q96G25 268 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 MYO19Q96H55 970 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 TEX10Q9NXF1 929 aaPredicted RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 DLGAP4Q9Y2H0 992 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 YARS2Q9Y2Z4 477 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 FCF1Q9Y324 198 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 ZNF638Q14966 1978 aaKnown RBP8.17□□□□□ -1.1
DDB1-217ENST00000540166 SPTA1P02549 2419 aa8.17□□□□□ -1.1
DDB1-217ENST00000540166 C2orf92A0A1B0GVN3 265 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 CBX7O95931 251 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 LGI1O95970 557 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 CD3GP09693 182 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 GABRB1P18505 474 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 GABRG2P18507 467 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 C5AR1P21730 350 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 BCKDHBP21953 392 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 NFYAP23511 347 aaPredicted RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 ZFP36L2P47974 494 aaKnown RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 SUOXP51687 545 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 GK2Q14410 553 aaPredicted RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 LGALSLQ3ZCW2 172 aaPredicted RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 PDSS1Q5T2R2 415 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 SFRP4Q6FHJ7 346 aaPredicted RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 RAET1GQ6H3X3 334 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 NFKBIDQ8NI38 313 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 NKX6-2Q9C056 277 aaPredicted RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 NMNAT1Q9HAN9 279 aaPredicted RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 SLC6A13Q9NSD5 602 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 THAP10Q9P2Z0 257 aaPredicted RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 EXO1Q9UQ84 846 aaKnown RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 NINQ8N4C6 2090 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 PATE3B3GLJ2 98 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 PTBP1P26599 531 aaKnown RBP eCLIP8.16□□□□□ -1.1
DDB1-217ENST00000540166 VIPR1P32241 457 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 ZNF140P52738 457 aaPredicted RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 AP3S2P59780 193 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms