RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 MEP1AQ16819 746 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 LSM14AQ8ND56 463 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 BHLHE22Q8NFJ8 381 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 OR4C3Q8NH37 302 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 TAMM41Q96BW9 452 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ZNF354BQ96LW1 612 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ZNF607Q96SK3 696 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PCDHGA10Q9Y5H3 936 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 OR6C70A6NIJ9 312 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 NPIPB9F8W1W9 429 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PDE9AO76083 593 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OR6B1O95007 311 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 MFN2O95140 757 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 STAMBPO95630 424 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SERPINA1P01009 418 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SSR4P51571 173 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 DMTNQ08495 405 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF791Q3KP31 576 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF468Q5VIY5 522 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 IRAK1BP1Q5VVH5 260 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OPN5Q6U736 354 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 KRT73Q86Y46 540 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 BEST3Q8N1M1 668 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OR52E4Q8NGH9 312 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OR5M3Q8NGP4 307 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SPACA9Q96E40 222 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 DENND2DQ9H6A0 471 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 DCAF13Q9NV06 445 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 BOD1L1Q8NFC6 3051 aa17.39■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TCRBV5S2A0A599 114 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 AGAP5A6NIR3 686 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TMEM229AB2RXF0 380 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ICOSLGO75144 302 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 UTS2O95399 124 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PRB1P04280 392 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 DCTP40126 519 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TMED10P49755 219 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ATP12AP54707 1039 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 KPNB1Q14974 876 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 NTRK2Q16620 822 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 GRAMD1BQ3KR37 738 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ABHD17BQ5VST6 288 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 VRK2Q86Y07 508 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 APLFQ8IW19 511 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TMEM156Q8N614 296 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SMYD1Q8NB12 490 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OR10Q1Q8NGQ4 319 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ASB15Q8WXK1 588 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PMM1Q92871 262 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 HGDQ93099 445 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 LRGUKQ96M69 825 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF552Q9H707 407 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 GPR83Q9NYM4 423 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 STMN3Q9NZ72 180 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TEKT2Q9UIF3 430 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CFAP46Q8IYW2 2715 aa17.38■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ABCB7O75027 752 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SERPINB7O75635 380 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PABPC4LP0CB38 370 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 RPS4Y1P22090 263 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 LCN1P31025 176 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CCNIQ14094 377 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ZNF141Q15928 474 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CYBRD1Q53TN4 286 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 IL20RBQ6UXL0 311 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CBLL1Q75N03 491 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 NUP54Q7Z3B4 507 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ARMC8Q8IUR7 673 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PEX5LQ8IYB4 626 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 FAM86B1Q8N7N1 296 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OR52P1PQ8NH57 321 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SPPL2AQ8TCT8 520 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 WBP1Q96G27 269 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 NODALQ96S42 347 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 UBQLN4Q9NRR5 601 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SEC14L3Q9UDX4 400 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 AQP12BA6NM10 295 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CLDN24A6NM45 220 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 HS6ST1O60243 411 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TPST1O60507 370 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 C1QL1O75973 258 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OXSR1O95747 527 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 CD247P20963 164 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 RNF144AP50876 292 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ACTR3P61158 418 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 EFR3AQ14156 821 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 DUSP7Q16829 419 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 PDZK1Q5T2W1 519 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 LINC00696Q6ZRV3 163 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 EIF3MQ7L2H7 374 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SPATA24Q86W54 205 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 AQP12AQ8IXF9 295 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 FDCSPQ8NFU4 85 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 GPR32P1Q8NGA4 272 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OR10G3Q8NGC4 313 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SLC26A7Q8TE54 656 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 SPATA5L1Q9BVQ7 753 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 TRIM15Q9C019 465 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 OLAHQ9NV23 265 aa17.37■□□□□ 0.37
TNFRSF1A-213ENST00000540022 ANKRD10Q9NXR5 420 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms