RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ARRDC1-AS1Q9H2J1 176 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 FAM96AQ9H5X1 160 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 PNPOQ9NVS9 261 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 FKBPLQ9UIM3 349 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 MAGEL2Q9UJ55 1249 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 ITPR1Q14643 2758 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 GON4LQ3T8J9 2241 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 GCN1Q92616 2671 aaKnown RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 SPAG17Q6Q759 2223 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 BNIP3LO60238 219 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 NDUFS3O75489 264 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 ECI2O75521 394 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 HEXAP06865 529 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 FGF2P09038 288 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 FCGR1AP12314 374 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 DTYMKP23919 212 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 ARRB2P32121 409 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 AFF3P51826 1226 aaKnown RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 SELENOVP59797 346 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 CNN3Q15417 329 aaKnown RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 CSRP2Q16527 193 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 NRF1Q16656 503 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 AVPI1Q5T686 147 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 YOD1Q5VVQ6 348 aaPredicted RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 CLEC6AQ6EIG7 209 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 OR52M1Q8NGK5 317 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 GCDHQ92947 438 aaPredicted RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 IRF7Q92985 503 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 CMSS1Q9BQ75 279 aaKnown RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 ZNF2Q9BSG1 426 aaPredicted RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 INPP5KQ9BT40 448 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 TRMT61BQ9BVS5 477 aaKnown RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 SLIRPQ9GZT3 109 aaKnown RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 TMPRSS5Q9H3S3 457 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 SLC25A13Q9UJS0 675 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 KCND3Q9UK17 655 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 PKP3Q9Y446 797 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 FLNBO75369 2602 aaKnown RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 WASHC1A8K0Z3 465 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 E9PI62 339 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 DLX3O60479 287 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 DNAJB6O75190 326 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 ALPIP09923 528 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 CCNYL3P0C7X3 344 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 FDXRP22570 491 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 LCN1P31025 176 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 GKP32189 559 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 ETV6P41212 452 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 CTSOP43234 321 aaPredicted RBP11.82□□□□□ -0.52
DDX55-206ENST00000539934 GRK6P43250 576 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 RGS6P49758 472 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 STK19P49842 368 aaPredicted RBP11.82□□□□□ -0.52
DDX55-206ENST00000539934 MECP2P51608 486 aaKnown RBP11.82□□□□□ -0.52
DDX55-206ENST00000539934 CD81P60033 236 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 RAB2AP61019 212 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 SNRPD1P62314 119 aaKnown RBP11.82□□□□□ -0.52
DDX55-206ENST00000539934 ELP6Q0PNE2 266 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 POU4F2Q12837 409 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 SQSTM1Q13501 440 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 EXOSC2Q13868 293 aaKnown RBP11.82□□□□□ -0.52
DDX55-206ENST00000539934 PTGR1Q14914 329 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 ZRANB3Q5FWF4 1079 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 TECRLQ5HYJ1 363 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 PRSS36Q5K4E3 855 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 ZNF549Q6P9A3 640 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 WASH2PQ6VEQ5 465 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 RASSF6Q6ZTQ3 369 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 HSD17B13Q7Z5P4 300 aaPredicted RBP11.82□□□□□ -0.52
DDX55-206ENST00000539934 TAF8Q7Z7C8 310 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 PIM3Q86V86 326 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 SKA3Q8IX90 412 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 OR2AP1Q8NGE2 309 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 NDNFQ8TB73 568 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 OIT3Q8WWZ8 545 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 EBF4Q9BQW3 602 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 OR10A4Q9H209 315 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 ALG2Q9H553 416 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 SPAG4Q9NPE6 437 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 MED11Q9P086 117 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 DNAJB9Q9UBS3 223 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 TCFL5Q9UL49 500 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 CACNA1EQ15878 2313 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 A0A0U1RQS6 177 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 MID1O15344 667 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 HPGDSO60760 199 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 KRT33AO76009 404 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 TYRP14679 529 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 MAGP20916 626 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 SERPINA4P29622 427 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 GGT5P36269 586 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 CAPZBP47756 277 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 LIMS1P48059 325 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 NFKB2Q00653 900 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 OR8G1Q15617 311 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 ZNF77Q15935 545 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 HSF5Q4G112 596 aaPredicted RBP11.82□□□□□ -0.52
DDX55-206ENST00000539934 SLC16A14Q7RTX9 510 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 SPNS2Q8IVW8 549 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 SFRP1Q8N474 314 aa11.82□□□□□ -0.52
DDX55-206ENST00000539934 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms