RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 MS4A4EQ96PG1 132 aa15.16■□□□□ 0.02
DDB1-215ENST00000539712 C1orf50Q9BV19 199 aa15.16■□□□□ 0.02
DDB1-215ENST00000539712 C20orf27Q9GZN8 174 aa15.16■□□□□ 0.02
DDB1-215ENST00000539712 ZNF337Q9Y3M9 751 aa15.16■□□□□ 0.02
DDB1-215ENST00000539712 NUP214P35658 2090 aaPredicted RBP15.16■□□□□ 0.02
DDB1-215ENST00000539712 VPS13CQ709C8 3753 aa15.16■□□□□ 0.02
DDB1-215ENST00000539712 MTORP42345 2549 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 TMEM114B3SHH9 223 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 EMC8O43402 210 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 KCNK2O95069 426 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 ANGPTL1O95841 491 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 DHRS4L1P0CG22 281 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 HK1P19367 917 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 DGKQP52824 942 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 KRT71Q3SY84 523 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 IL23RQ5VWK5 629 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 LRIG3Q6UXM1 1119 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 R3HCC1LQ7Z5L2 792 aaKnown RBP15.15■□□□□ 0.02
DDB1-215ENST00000539712 NUDCD3Q8IVD9 361 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 FBXO30Q8TB52 745 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 OTUB1Q96FW1 271 aaPredicted RBP15.15■□□□□ 0.02
DDB1-215ENST00000539712 TM9SF2Q99805 663 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 KLHDC3Q9BQ90 382 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 C3orf14Q9HBI5 128 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 SDHAF3Q9NRP4 125 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 MRTO4Q9UKD2 239 aaKnown RBP15.15■□□□□ 0.02
DDB1-215ENST00000539712 ITGB1BP2Q9UKP3 347 aa15.15■□□□□ 0.02
DDB1-215ENST00000539712 ZNF469Q96JG9 3925 aaPredicted RBP15.15■□□□□ 0.02
DDB1-215ENST00000539712 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 OR2M5A3KFT3 312 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 ALG1L2C9J202 215 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 CTIFO43310 598 aaKnown RBP15.14■□□□□ 0.01
DDB1-215ENST00000539712 SKAP2O75563 359 aaPredicted RBP15.14■□□□□ 0.01
DDB1-215ENST00000539712 TNFSF13O75888 250 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 KCNH1O95259 989 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 NGFRP08138 427 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 TBXA2RP21731 343 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 PSMD4P55036 377 aaKnown RBP15.14■□□□□ 0.01
DDB1-215ENST00000539712 DIO3P55073 304 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 C17orf67Q0P5P2 114 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 GANABQ14697 944 aaKnown RBP15.14■□□□□ 0.01
DDB1-215ENST00000539712 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.14■□□□□ 0.01
DDB1-215ENST00000539712 VPS26BQ4G0F5 336 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 ATP6AP1LQ52LC2 224 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 ZCCHC12Q6PEW1 402 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 FIGNL1Q6PIW4 674 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 SLC9A6Q92581 669 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 ZBTB9Q96C00 473 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 INTS12Q96CB8 462 aaKnown RBP15.14■□□□□ 0.01
DDB1-215ENST00000539712 ZFP3Q96NJ6 502 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 YIPF4Q9BSR8 244 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 SFXN3Q9BWM7 321 aa15.14■□□□□ 0.01
DDB1-215ENST00000539712 SSU72Q9NP77 194 aaKnown RBP15.14■□□□□ 0.01
DDB1-215ENST00000539712 FOXD3Q9UJU5 478 aaPredicted RBP15.14■□□□□ 0.01
DDB1-215ENST00000539712 A0A1W2PRB8 838 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 WDR91A4D1P6 747 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 RGS16O15492 202 aaPredicted RBP15.13■□□□□ 0.01
DDB1-215ENST00000539712 ZWINTO95229 277 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 OXSR1O95747 527 aaPredicted RBP15.13■□□□□ 0.01
DDB1-215ENST00000539712 HMGN2P05204 90 aaKnown RBP15.13■□□□□ 0.01
DDB1-215ENST00000539712 PEPDP12955 493 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 MAPK1P28482 360 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 HPCAL1P37235 193 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 CLDN20P56880 219 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 C21orf58P58505 322 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 DAZAP2Q15038 168 aaPredicted RBP15.13■□□□□ 0.01
DDB1-215ENST00000539712 GLYR1Q49A26 553 aaPredicted RBP15.13■□□□□ 0.01
DDB1-215ENST00000539712 FLYWCH1Q4VC44 716 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 CPTPQ5TA50 214 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 RAET1LQ5VY80 246 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 TMEM200AQ86VY9 491 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 GCNT2Q8N0V5 402 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 ZNF781Q8N8C0 355 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 FNDC5Q8NAU1 212 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 FAM222BQ8WU58 562 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 DTNBP1Q96EV8 351 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 SORT1Q99523 831 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 NPAS1Q99742 590 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 TBL1XR1Q9BZK7 514 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 CXorf36Q9H7Y0 433 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 RASSF1Q9NS23 344 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 GPATCH2Q9NW75 528 aa15.13■□□□□ 0.01
DDB1-215ENST00000539712 SETD2Q9BYW2 2564 aaPredicted RBP15.13■□□□□ 0.01
DDB1-215ENST00000539712 SHISA8B8ZZ34 492 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 EEF1E1-BLOC1S5C9J1V9 151 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 BIRC5O15392 142 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 EEF1E1O43324 174 aaKnown RBP15.12■□□□□ 0.01
DDB1-215ENST00000539712 SERPINE1P05121 402 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 G6PDP11413 515 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 DNAJA1P31689 397 aaKnown RBP15.12■□□□□ 0.01
DDB1-215ENST00000539712 PEX19P40855 299 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 CLK3P49761 638 aaKnown RBP15.12■□□□□ 0.01
DDB1-215ENST00000539712 EMX2Q04743 252 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 CHI3L2Q15782 390 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 CCNJQ5T5M9 372 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 SZRD1Q7Z422 152 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 UBQLNLQ8IYU4 475 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 OR5P2Q8WZ92 322 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 FIG4Q92562 907 aa15.12■□□□□ 0.01
DDB1-215ENST00000539712 TUBGCP3Q96CW5 907 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms