RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 OR56A1Q8NGH5 318 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 GNPDA2Q8TDQ7 276 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 UFD1Q92890 307 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 C10orf90Q96M02 699 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 MYADMQ96S97 322 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 ARHGDIGQ99819 225 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 RBCK1Q9BYM8 510 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 TMEM168Q9H0V1 697 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 PPIL3Q9H2H8 161 aaKnown RBP13.12□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF221Q9UK13 617 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 CLCA3PQ9Y6N3 262 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 WDR87Q6ZQQ6 2873 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 KRT8P05787 483 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 GYPBP06028 91 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 POLR2CP19387 275 aaPredicted RBP13.12□□□□□ -0.31
UBE3B-210ENST00000539599 KIR2DL3P43628 341 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 SLC16A1P53985 500 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 FXYD6P3P58550 94 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 CD83Q01151 205 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 TMEM35AQ53FP2 167 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 C3orf38Q5JPI3 329 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 PDZK1Q5T2W1 519 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 CD300LDQ6UXZ3 194 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 QSOX2Q6ZRP7 698 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 ZAR1Q86SH2 424 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 AMIGO1Q86WK6 493 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 GHDCQ8N2G8 530 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 PIGXQ8TBF5 258 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 SPATA5L1Q9BVQ7 753 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 CCDC86Q9H6F5 360 aaKnown RBP13.12□□□□□ -0.31
UBE3B-210ENST00000539599 KCNE5Q9UJ90 142 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 SNX7Q9UNH6 387 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 TRAPPC4Q9Y296 219 aa13.12□□□□□ -0.31
UBE3B-210ENST00000539599 IQCMA0A1B0GVH7 501 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 LRRC72A6NJI9 287 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 TTC36A6NLP5 189 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 ACADMP11310 421 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 HTR2AP28223 471 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 GCGRP47871 477 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 CTBP2P56545 445 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 PPP1CAP62136 330 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 TRA2BP62995 288 aaKnown RBP13.11□□□□□ -0.31
UBE3B-210ENST00000539599 BNC1Q01954 994 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 RAB40BQ12829 278 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 MINDY4Q4G0A6 757 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 KLHL12Q53G59 568 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF542PQ5EBM4 170 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 FBXO42Q6P3S6 717 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 CNIH2Q6PI25 160 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 TMEM64Q6YI46 380 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 YAF2Q8IY57 180 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 NATD1Q8N6N6 113 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 TMEM99Q8N816 258 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF485Q8NCK3 441 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 TMCO6Q96DC7 493 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 ARHGAP9Q9BRR9 750 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF649Q9BS31 505 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF443Q9Y2A4 671 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-210ENST00000539599 SLC17A4Q9Y2C5 497 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 WDR45Q9Y484 360 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 SDK1Q7Z5N4 2213 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 OR2W5A6NFC9 320 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 K7EQS6 105 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 GNB5O14775 395 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 SLC30A4O14863 429 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 HCRTR1O43613 425 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 MAKP20794 623 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 CPN2P22792 545 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 SLC9A3P48764 834 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 ADPRHP54922 357 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 ST3GAL3Q11203 375 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 CCDC85BQ15834 202 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-210ENST00000539599 KLHL22Q53GT1 634 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 TMEM196Q5HYL7 178 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 AADACL4Q5VUY2 407 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF425Q6IV72 752 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 MFSD12Q6NUT3 480 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 RPTNQ6XPR3 784 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 RAB43Q86YS6 212 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 ZNF614Q8N883 585 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 CYB561A3Q8NBI2 242 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 SLC38A2Q96QD8 506 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 CBLCQ9ULV8 474 aa13.11□□□□□ -0.31
UBE3B-210ENST00000539599 PRSS38A1L453 326 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 KDM4EB2RXH2 506 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-210ENST00000539599 E9PI62 339 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 GABRPO00591 440 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 CASC3O15234 703 aaKnown RBP13.1□□□□□ -0.31
UBE3B-210ENST00000539599 IDH3BO43837 385 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 PRKNO60260 465 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-210ENST00000539599 IL1AP01583 271 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 EN2P19622 333 aaPredicted RBP13.1□□□□□ -0.31
UBE3B-210ENST00000539599 CMPK1P30085 196 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 ACTR1BP42025 376 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 ACTR1AP61163 376 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 ERVK-21P61565 698 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 DMPKQ09013 629 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 BCL2A1Q16548 175 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 THSD4Q6ZMP0 1018 aa13.1□□□□□ -0.31
UBE3B-210ENST00000539599 RASSF6Q6ZTQ3 369 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms