RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 PLA2G2FQ9BZM2 168 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 PRDM7Q9NQW5 492 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 SPHK1Q9NYA1 384 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 P2RX2Q9UBL9 471 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ENOPH1Q9UHY7 261 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 RABL2BQ9UNT1 228 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 GPR55Q9Y2T6 319 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ASB4Q9Y574 426 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ALPK2Q86TB3 2170 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 A0A1W2PP55 124 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 A0A1W2PRQ8 180 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 CPSF4LA6NMK7 179 aaKnown RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ERAL1O75616 437 aaKnown RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 HMGN2P05204 90 aaKnown RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 SPTBP11277 2137 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 DRD5P21918 477 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 GJA4P35212 333 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 TRIM23P36406 574 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 GAS1P54826 345 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 MAB21L1Q13394 359 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 LASP1Q14847 261 aaKnown RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ZIC1Q15915 447 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 VITQ6UXI7 678 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 IZUMO1Q8IYV9 350 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 RASSF5Q8WWW0 418 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 PMEPA1Q969W9 287 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 MS4A6EQ96DS6 147 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 WDFY2Q96P53 400 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ATF6BQ99941 703 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 PPP1R3EQ9H7J1 279 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ATP13A2Q9NQ11 1180 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 KLHL1Q9NR64 748 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 CHST2Q9Y4C5 530 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ATG2BQ96BY7 2078 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 PRR23AA6NEV1 266 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 C5orf67F2Z3F1 127 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 C1QBP02746 253 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 CD3GP09693 182 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ATF4P18848 351 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 GPR176Q14439 515 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 FCRLBQ6BAA4 426 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 FAM109BQ6ICB4 259 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 MZT2BQ6NZ67 158 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 OR8D4Q8NGM9 314 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 UFD1Q92890 307 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 GCDHQ92947 438 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 RAB7BQ96AH8 199 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ZNF764Q96H86 408 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ABCG5Q9H222 651 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 C6orf106Q9H6K1 298 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 WDR26Q9H7D7 661 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ADAM29Q9UKF5 820 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 GSTK1Q9Y2Q3 226 aa11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.75□□□□□ -0.53
SFSWAP-208ENST00000539506 MAGEB4O15481 346 aaPredicted RBP11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 CLEC3AO75596 197 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 RPN2P04844 631 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 CPEP16870 476 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 HSD17B2P37059 387 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 GPR4P46093 362 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 CCR6P51684 374 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 PLK5Q496M5 336 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 TMEM107Q6UX40 140 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 PRICKLE2Q7Z3G6 844 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 SHISA5Q8N114 240 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 CEP76Q8TAP6 659 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 SPRYD4Q8WW59 207 aaPredicted RBP11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 CHIAQ9BZP6 476 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 PCBD2Q9H0N5 130 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 PTGFRNQ9P2B2 879 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 ERI3O43414 337 aaKnown RBP11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 PRICKLE3O43900 615 aaPredicted RBP11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 KAT7O95251 611 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 ZIC2O95409 532 aaPredicted RBP11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 LGI1O95970 557 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 CEACAM5P06731 702 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 LIMS3P0CW19 117 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 LIMS4P0CW20 117 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 MTNR1AP48039 350 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 RAB28P51157 221 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 CST6Q15828 149 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 ACOT4Q8N9L9 421 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 OR52E1Q8NGJ3 308 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 FCRL4Q96PJ5 515 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 TRMT61BQ9BVS5 477 aaKnown RBP11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 SLC6A17Q9H1V8 727 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 MED28Q9H204 178 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 CES1P1Q9UKY3 287 aa11.74□□□□□ -0.53
SFSWAP-208ENST00000539506 CACNA1CQ13936 2221 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 GABRPO00591 440 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 ORC5O43913 435 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 FCER2P06734 321 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 TBXA2RP21731 343 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 CERS1P27544 350 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 EVX1P49640 407 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 CLDN2P57739 230 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 VSX2P58304 361 aaPredicted RBP11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 KLHL22Q53GT1 634 aa11.73□□□□□ -0.53
SFSWAP-208ENST00000539506 ESCO2Q56NI9 601 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms