RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PPP3R2Q96LZ3 170 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 ROPN1BQ9BZX4 212 aaPredicted RBP20.06■□□□□ 0.8
SCARB1-206ENST00000539320 ROPN1Q9HAT0 212 aaPredicted RBP20.06■□□□□ 0.8
SCARB1-206ENST00000539320 IGLV3-32A0A0A0MS00 114 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 A0A1W2PNV4 684 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 OR2M5A3KFT3 312 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 SLC22A20A6NK97 555 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 TMEM114B3SHH9 223 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 LINC01387J3KSC0 135 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 SCAMP2O15127 329 aaKnown RBP20.05■□□□□ 0.8
SCARB1-206ENST00000539320 EMC8O43402 210 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 ANGPTL1O95841 491 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 ACP2P11117 423 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 SERPINB5P36952 375 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 DIO3P55073 304 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 PRR5P85299 388 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 MFSD12Q6NUT3 480 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 LRIG3Q6UXM1 1119 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 PIGQQ9BRB3 760 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 GIMAP2Q9UG22 337 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 ST6GALNAC2Q9UJ37 374 aa20.05■□□□□ 0.8
SCARB1-206ENST00000539320 PRRC2AP48634 2157 aaKnown RBP20.04■□□□□ 0.8
SCARB1-206ENST00000539320 PCNX3Q9H6A9 2034 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 H3BML4 177 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 SEC14L5O43304 696 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 TNFSF13O75888 250 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 CRHP06850 196 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 EFNA1P20827 205 aaPredicted RBP20.04■□□□□ 0.8
SCARB1-206ENST00000539320 RPL3P39023 403 aaKnown RBP20.04■□□□□ 0.8
SCARB1-206ENST00000539320 EEFSECP57772 596 aaKnown RBP20.04■□□□□ 0.8
SCARB1-206ENST00000539320 C17orf67Q0P5P2 114 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 FBXW10Q5XX13 1052 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 OR2A2Q6IF42 318 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 APOOLQ6UXV4 268 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 GALNT10Q86SR1 603 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 EXOC3L1Q86VI1 746 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 OR5M1Q8NGP8 315 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 ATP6V1HQ9UI12 483 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 ZNF337Q9Y3M9 751 aa20.04■□□□□ 0.8
SCARB1-206ENST00000539320 ALG1L2C9J202 215 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 GOSR1O95249 250 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 OXSR1O95747 527 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-206ENST00000539320 NGFRP08138 427 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 ARRB2P32121 409 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 CPOXP36551 454 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 PRIM2P49643 509 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 CLDN15P56746 228 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 DUSP5Q16690 384 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.03■□□□□ 0.8
SCARB1-206ENST00000539320 GLYR1Q49A26 553 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-206ENST00000539320 ATP6AP1LQ52LC2 224 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 COX18Q8N8Q8 333 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 OR6Y1Q8NGX8 325 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 SMPDL3BQ92485 455 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 FIG4Q92562 907 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 CAVIN3Q969G5 261 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 FOXC2Q99958 501 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 YIPF4Q9BSR8 244 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 LIME1Q9H400 295 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 HHATLQ9HCP6 504 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 SIRT3Q9NTG7 399 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-206ENST00000539320 CCM2LQ9NUG4 571 aaPredicted RBP20.03■□□□□ 0.8
SCARB1-206ENST00000539320 PLEKHA6Q9Y2H5 1048 aa20.03■□□□□ 0.8
SCARB1-206ENST00000539320 H0YC42 278 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 GMFGO60234 142 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 PEX11AO75192 247 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 SKAP2O75563 359 aaPredicted RBP20.02■□□□□ 0.8
SCARB1-206ENST00000539320 KCNK2O95069 426 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 ALOX5P09917 674 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 SUCLG1P53597 346 aaKnown RBP20.02■□□□□ 0.8
SCARB1-206ENST00000539320 TPD52P55327 224 aaPredicted RBP20.02■□□□□ 0.8
SCARB1-206ENST00000539320 MLC1Q15049 377 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 ZCCHC12Q6PEW1 402 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 FIGNL1Q6PIW4 674 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 SLC16A11Q8NCK7 471 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 OR7A2PQ8NGA2 310 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 JADE3Q92613 823 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 FAM120BQ96EK7 910 aaKnown RBP20.02■□□□□ 0.8
SCARB1-206ENST00000539320 DACH2Q96NX9 599 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 C1orf50Q9BV19 199 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 PINK1Q9BXM7 581 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 ZCCHC3Q9NUD5 404 aaKnown RBP20.02■□□□□ 0.8
SCARB1-206ENST00000539320 EDARQ9UNE0 448 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 ZNF175Q9Y473 711 aa20.02■□□□□ 0.8
SCARB1-206ENST00000539320 ITPR3Q14573 2671 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 A8MXE2 369 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 MSTNO14793 375 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 NDUFB5O43674 189 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 TNFRSF21O75509 655 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 SLU7O95391 586 aaKnown RBP20.01■□□□□ 0.79
SCARB1-206ENST00000539320 BPGMP07738 259 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 CREB1P16220 341 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 DNASE1P24855 282 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 LCN1P31025 176 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 CLDN20P56880 219 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 RIPPLY3P57055 190 aa20.01■□□□□ 0.79
SCARB1-206ENST00000539320 RPS3AP61247 264 aaKnown RBP20.01■□□□□ 0.79
SCARB1-206ENST00000539320 EXOSC6Q5RKV6 272 aaKnown RBP20.01■□□□□ 0.79
SCARB1-206ENST00000539320 WDR93Q6P2C0 686 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms