RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ACTRT3Q9BYD9 372 aa13.58□□□□□ -0.23
CDCA3-207ENST00000538862 OR2B2Q9GZK3 357 aa13.58□□□□□ -0.23
CDCA3-207ENST00000538862 SLC22A4Q9H015 551 aa13.58□□□□□ -0.23
CDCA3-207ENST00000538862 QRSL1Q9H0R6 528 aaKnown RBP13.58□□□□□ -0.23
CDCA3-207ENST00000538862 TIGARQ9NQ88 270 aa13.58□□□□□ -0.23
CDCA3-207ENST00000538862 SEMA4GQ9NTN9 838 aa13.58□□□□□ -0.23
CDCA3-207ENST00000538862 MMP17Q9ULZ9 603 aa13.58□□□□□ -0.23
CDCA3-207ENST00000538862 SLC17A4Q9Y2C5 497 aa13.58□□□□□ -0.23
CDCA3-207ENST00000538862 STON1Q9Y6Q2 735 aa13.58□□□□□ -0.23
CDCA3-207ENST00000538862 ZNF780BQ9Y6R6 833 aa13.58□□□□□ -0.23
CDCA3-207ENST00000538862 ABCA7Q8IZY2 2146 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 DUXAA6NLW8 204 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 A8MU76 341 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 STATHP02808 62 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 CEACAM5P06731 702 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 CCNYL3P0C7X3 344 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 LIMS3P0CW19 117 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 LIMS4P0CW20 117 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 C8orf89P0DMQ9 161 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 FPR3P25089 353 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 CERS1P27544 350 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 CMPK1P30085 196 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 PTGER1P34995 402 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 DDOSTP39656 456 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 MC3RP41968 323 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 NKX2-5P52952 324 aaPredicted RBP13.58□□□□□ -0.24
CDCA3-207ENST00000538862 MRPS21P82921 87 aaKnown RBP13.58□□□□□ -0.24
CDCA3-207ENST00000538862 IFITM2Q01629 132 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 FGL2Q14314 439 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 CRTC2Q53ET0 693 aaPredicted RBP13.58□□□□□ -0.24
CDCA3-207ENST00000538862 SMUG1Q53HV7 270 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 ZNF628Q5EBL2 1059 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 PDZK1Q5T2W1 519 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 NXNL2Q5VZ03 156 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 VRK2Q86Y07 508 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 FAM20CQ8IXL6 584 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 SUMF1Q8NBK3 374 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 ACOT11Q8WXI4 607 aaPredicted RBP13.58□□□□□ -0.24
CDCA3-207ENST00000538862 TPSD1Q9BZJ3 242 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 ANKRA2Q9H9E1 313 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 IL20Q9NYY1 176 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 SNX7Q9UNH6 387 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 ZFR2Q9UPR6 939 aaKnown RBP13.58□□□□□ -0.24
CDCA3-207ENST00000538862 GPR52Q9Y2T5 361 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 RBMX2Q9Y388 322 aaKnown RBP13.58□□□□□ -0.24
CDCA3-207ENST00000538862 CHST2Q9Y4C5 530 aa13.58□□□□□ -0.24
CDCA3-207ENST00000538862 MDC1Q14676 2089 aaKnown RBP13.58□□□□□ -0.24
CDCA3-207ENST00000538862 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 CPSF4LA6NMK7 179 aaKnown RBP13.57□□□□□ -0.24
CDCA3-207ENST00000538862 AP3D1O14617 1153 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 LATO43561 262 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 AGR2O95994 175 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 S100A1P23297 94 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 AZGP1P25311 298 aaKnown RBP13.57□□□□□ -0.24
CDCA3-207ENST00000538862 CDH11P55287 796 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 ACSM1Q08AH1 577 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 ENPP2Q13822 863 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 SF3B4Q15427 424 aaKnown RBP eCLIP13.57□□□□□ -0.241e-7■■■■□ 24.5
CDCA3-207ENST00000538862 ATAD3CQ5T2N8 411 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 ZNF425Q6IV72 752 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 HEPHL1Q6MZM0 1159 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 NRROSQ86YC3 692 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 TMEM145Q8NBT3 493 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 TSTD1Q8NFU3 115 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 OR9A2Q8NGT5 310 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 CAPSLQ8WWF8 208 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 ZG16BQ96DA0 208 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 GIMAP5Q96F15 307 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 FAM46AQ96IP4 442 aaKnown RBP13.57□□□□□ -0.24
CDCA3-207ENST00000538862 SNX18Q96RF0 628 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 PRR14Q9BWN1 585 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 C1QTNF2Q9BXJ5 285 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 SYNDIG1Q9H7V2 258 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 CNIH4Q9P003 139 aa13.57□□□□□ -0.24
CDCA3-207ENST00000538862 APOBEC3BQ9UH17 382 aaKnown RBP13.57□□□□□ -0.24
CDCA3-207ENST00000538862 EXOGQ9Y2C4 368 aaKnown RBP13.57□□□□□ -0.24
CDCA3-207ENST00000538862 GPR55Q9Y2T6 319 aaPredicted RBP13.57□□□□□ -0.24
CDCA3-207ENST00000538862 GON4LQ3T8J9 2241 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 DMXL1Q9Y485 3027 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 MEIOCA2RUB1 952 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 HMX3A6NHT5 357 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 OR52A4PA6NMU1 304 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 POLR1CO15160 346 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 SURF4O15260 269 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 CHST10O43529 356 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 TMCC2O75069 709 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 CSF3P09919 207 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 HOXB3P14651 431 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 PEBP1P30086 187 aaKnown RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 SLC1A3P43003 542 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 PPP3R1P63098 170 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 RPS21P63220 83 aaKnown RBP13.56□□□□□ -0.24
CDCA3-207ENST00000538862 FABP5Q01469 135 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 SGCGQ13326 291 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 DSG2Q14126 1118 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 AADACL4Q5VUY2 407 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 C16orf62Q7Z3J2 963 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 WDR5BQ86VZ2 330 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 OR52P1PQ8NH57 321 aa13.56□□□□□ -0.24
CDCA3-207ENST00000538862 TP63Q9H3D4 680 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms