RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 CLCF1Q9UBD9 225 aa13.55□□□□□ -0.24
RAB40B-202ENST00000538809 ZNF629Q9UEG4 869 aaPredicted RBP13.55□□□□□ -0.24
RAB40B-202ENST00000538809 MRTO4Q9UKD2 239 aaKnown RBP13.55□□□□□ -0.24
RAB40B-202ENST00000538809 ABCA4P78363 2273 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 SYT5O00445 386 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 KCNH1O95259 989 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 HSPA4LO95757 839 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 LAMP1P11279 417 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 POU3F2P20265 443 aaPredicted RBP13.54□□□□□ -0.24
RAB40B-202ENST00000538809 CHMP24386 653 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 PSMD4P55036 377 aaKnown RBP13.54□□□□□ -0.24
RAB40B-202ENST00000538809 C21orf58P58505 322 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 SMU1Q2TAY7 513 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 FBXL19-AS1Q494R0 122 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 BEND6Q5SZJ8 279 aaPredicted RBP13.54□□□□□ -0.24
RAB40B-202ENST00000538809 IL23RQ5VWK5 629 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 FIGNL1Q6PIW4 674 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 APOOLQ6UXV4 268 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 ZAR1Q86SH2 424 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 ADGRE4PQ86SQ3 457 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 GRAMD2AQ8IUY3 354 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 FNDC5Q8NAU1 212 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 PSMA8Q8TAA3 256 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 NUDT8Q8WV74 236 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 JADE3Q92613 823 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 INTS12Q96CB8 462 aaKnown RBP13.54□□□□□ -0.24
RAB40B-202ENST00000538809 COQ8BQ96D53 544 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 LRRC46Q96FV0 321 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 GPATCH1Q9BRR8 931 aaKnown RBP13.54□□□□□ -0.24
RAB40B-202ENST00000538809 TBL1XR1Q9BZK7 514 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 CENPHQ9H3R5 247 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 C3orf14Q9HBI5 128 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 SDHAF3Q9NRP4 125 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.54□□□□□ -0.24
RAB40B-202ENST00000538809 MRPS18CQ9Y3D5 142 aaKnown RBP13.54□□□□□ -0.24
RAB40B-202ENST00000538809 RAP2CQ9Y3L5 183 aa13.54□□□□□ -0.24
RAB40B-202ENST00000538809 SHISA8B8ZZ34 492 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 H3BML4 177 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 SEC14L5O43304 696 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 EMC8O43402 210 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
RAB40B-202ENST00000538809 ANGPTL1O95841 491 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 BGNP21810 368 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 OPRM1P35372 400 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 RPL3P39023 403 aaKnown RBP13.53□□□□□ -0.24
RAB40B-202ENST00000538809 SLC1A6P48664 564 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 CLK3P49761 638 aaKnown RBP13.53□□□□□ -0.24
RAB40B-202ENST00000538809 WDR4P57081 412 aaKnown RBP13.53□□□□□ -0.24
RAB40B-202ENST00000538809 EMX2Q04743 252 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 DUSP5Q16690 384 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 VPS26BQ4G0F5 336 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 FLYWCH1Q4VC44 716 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 MFSD12Q6NUT3 480 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 LUZP2Q86TE4 346 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 KRTCAP2Q8N6L1 136 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 CDRT4Q8N9R6 151 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 GATSQ8NAP1 163 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 SLC16A11Q8NCK7 471 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 CEP70Q8NHQ1 597 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 PPP1R14CQ8TAE6 165 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 FAM110BQ8TC76 370 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 DUSP19Q8WTR2 217 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 SMPDL3BQ92485 455 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 WNT2BQ93097 391 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 TUBGCP3Q96CW5 907 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 FAM120BQ96EK7 910 aaKnown RBP13.53□□□□□ -0.24
RAB40B-202ENST00000538809 C1GALT1C1Q96EU7 318 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 C16orf58Q96GQ5 468 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 TM9SF2Q99805 663 aa13.53□□□□□ -0.24
RAB40B-202ENST00000538809 DNAJB12Q9NXW2 375 aaKnown RBP13.53□□□□□ -0.24
RAB40B-202ENST00000538809 OR2M5A3KFT3 312 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 H0YC42 278 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 HCRTR2O43614 444 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 RCBTB2O95199 551 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 OXSR1O95747 527 aaPredicted RBP13.52□□□□□ -0.25
RAB40B-202ENST00000538809 TGM6O95932 706 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 G6PDP11413 515 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 TPD52P55327 224 aaPredicted RBP13.52□□□□□ -0.25
RAB40B-202ENST00000538809 GANABQ14697 944 aaKnown RBP13.52□□□□□ -0.25
RAB40B-202ENST00000538809 PDCD2Q16342 344 aaPredicted RBP13.52□□□□□ -0.25
RAB40B-202ENST00000538809 CCNJQ5T5M9 372 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 P4HA3Q7Z4N8 544 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 CAMKMTQ7Z624 323 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 COX18Q8N8Q8 333 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 TLCD1Q96CP7 247 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 CHMP6Q96FZ7 201 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 PPP1R36Q96LQ0 422 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 ZFP3Q96NJ6 502 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 SFXN3Q9BWM7 321 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 POLDIP3Q9BY77 421 aaKnown RBP13.52□□□□□ -0.25
RAB40B-202ENST00000538809 PTGES2Q9H7Z7 377 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 AKTIPQ9H8T0 292 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 KCNK9Q9NPC2 374 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 ZCCHC3Q9NUD5 404 aaKnown RBP13.52□□□□□ -0.25
RAB40B-202ENST00000538809 FBXO34Q9NWN3 711 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 SNX8Q9Y5X2 465 aa13.52□□□□□ -0.25
RAB40B-202ENST00000538809 IGLV3-32A0A0A0MS00 114 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 A0A1W2PRB8 838 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 CTAG2O75638 210 aa13.51□□□□□ -0.25
RAB40B-202ENST00000538809 KCNK2O95069 426 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms